Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3290 ATGATGATAAATGATGACGAATGGAGGTATCTCGATCTTGGCAAGGTGCTGCTGCTTCCTAGTTTTGGAGGCCTTCCTCAATGGGCCGTAGTAGGGGACACATTCCCACTTGGTTGCAGATTTGATGAATCCGTTGTTCACCACAAGTATTTTAAGGAAAATCCAGACTACGACAGTCCAGCATACAACACTAAATATGGGATTTACTCAGAGAAATGTGGACTTAACAATGTGATGATGTCATGGGGACACGATGACTACATGTATCTTGTGGCAAAGGAGAATAATACCACACTGCCCTCTGCTGCTTTGTTCATTATAAGATACCATTCATTCCATGCATTACATAGGGAAGGAGCCTATAAGCACTTGATGAATAATGAGGACGTTGAGAATCTGAAATGGCTCCACATTTTCAGCAAATATGACCTTTACAGCAAAAGCAATGTTCGAATTGATGTTGAAAAGGTCAAACCATACTATCTCTCCCTCATTGAAAAGTACTTCCCTGCAAAGCTGAGGTGGTGA 528 0.4167 MMINDDEWRYLDLGKVLLLPSFGGLPQWAVVGDTFPLGCRFDESVVHHKYFKENPDYDSPAYNTKYGIYSEKCGLNNVMMSWGHDDYMYLVAKENNTTLPSAALFIIRYHSFHALHREGAYKHLMNNEDVENLKWLHIFSKYDLYSKSNVRIDVEKVKPYYLSLIEKYFPAKLRW 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3290 175 Pfam Myo-inositol oxygenase 12 175 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Ssu4g3290 175 PANTHER MYOINOSITOL OXYGENASE 12 175 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Ssu4g3290 175 PANTHER INOSITOL OXYGENASE 1 12 175 - -
Ssu4g3290 175 SUPERFAMILY HD-domain/PDEase-like 11 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3290 Ssu-Chr4 82767605 82770548 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3290 K00469 - gmx:100809388 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3290 4 82767605 82770548 Ssu4g3290 4 82767605 82770548 ECH