Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3287 ATGAGCTCAGTGCTTCGTGTACAACCTGATGAAGCTATATATTTGAAGATCAACAATAAAGTTCCTGGTCTGGGAATGAGATTAGACAGAAGTGACCTAAATTTGCTTTTCCGAGCAAGGTATCCAAGAGAAATTCCAGATGCATATGAGAGGTTACTCTTAGATGCCATTGAAGGCGAGCGAAGGCTGTTCATTAGAAGTGATGAGCTTGATGCAGCTTGGGCACTATTCACTCCTTTgctaaaagaaattgaaaacaagAAGATTGCTCCGGAGCTCTATCCCTATGGTAGCAGGGGACCTGTTGGAGCACATTACCTTGCTGCAAGGCACAATGTAAGATGGGGGGATCTTGGCAACGACGACTCATAA 372 0.422 MSSVLRVQPDEAIYLKINNKVPGLGMRLDRSDLNLLFRARYPREIPDAYERLLLDAIEGERRLFIRSDELDAAWALFTPLLKEIENKKIAPELYPYGSRGPVGAHYLAARHNVRWGDLGNDDS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3287 123 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 4 115 - -
Ssu4g3287 123 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 4 121 IPR001282 GO:0006006|GO:0016614|GO:0050661
Ssu4g3287 123 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 2, CHLOROPLASTIC 4 121 - -
Ssu4g3287 123 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 4 115 IPR022675 GO:0004345|GO:0006006|GO:0050661
Ssu4g3287 123 Gene3D Dihydrodipicolinate Reductase; domain 2 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3287 Ssu-Chr4 82748610 82749422 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3287 K00036 - gmx:100780018 240.35