Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3282 ATGAATAGGATGAGAAGGGGAATTGAAGAGGGCAAGGAGATTGGCCCAATGTTTCCAAGATTGCATGTCAAAGATGCAGAGAAAGGAGGGCCAAAAGCACCACCAAGGAATAAGATGGCACTCCACGAACAATTCAGCATCCCTTCTCAAAATTATCCACCAGGATCAGCATCCTTGTTTCCACTCCCGCTCAGAAACTACACAGGTCCTCCTACATCATCAAGCCACATCAGTAGCAGTCAAAGCATCCAATTCTGCACGTCTAGTGCACCTTCTATTCTGGCTGAGAAGATTCAAGCCTACAATTCCAGAAAGAGTAACATAACCAAATTCACCCAAGATGATTTCATCAATAGTAAGAATTCTCTGAAAACACCTGATGGCAAAGATGCTTTTATAACTTCTGGCTCTTCTCGTGGAAAAAATTCATGCTATAGCATCatccaaaataataaagatgaagACAAACTTGCTCGTTGTAATTTGAGCTGTTCGCTTAGAAGTCTGAATTCATTTAGAAAGAAGGTGAATTCACCTGGTGCTGTAGAACTGAAGTCAGCACAATATGAGAAGAGCCAGATGGAAGAGCATACACAAGTGAGTCAAATTGGTCAGAAGCCAGAGGAAGGGCTTACTCACTCATTAGATGGTTTTGGTGATATGACAAATGCATCATTAGTCTCATTGGTGAATGGTAACAATTCTAAATCAATGAATAAAGAACATAGATCTTTGAAGGAAGAAATTAGAAGTATTTCAGTAGATAGCTTGAAAACATTGCAAGGTAGCAGTGTCCATACACATGAAGAGTATGCAGCTTTTCGGGACAAAATCAACTCAAGGGACCATCACATTGAGAAACCAGCAGCCAGTGATGTCCACAAATGTCCCGGTGAGTTAGAACTTGGTAGATGGTGCTTCCTGGATAAGGGAGACAGGAATGAAGATGAGGAGACATATAGGCATTATGATGCCTTAAATAAAGCCAACTCAGAATGTACATTGGCTATGGATATTTCCCCTGACAATGTTGTAGGAGCTATAGGTGAACAGCAATTTTGGAAAGCCAGAAGAACTATCATCAATCAACAGAAAATCTTCGTCATGCAAGTGTTTGAGTTGCATAGACTGATAAAGAAGCAGGTGCAAAGATTAATTGCAGGCTCACCCCATATATTGCTAGAAGATAACCTTTTACTTAACAAGCCACCACCAAAAACATCTACAACCAAGAAATTTCAATCCGACTTTGTCGGCAAAAAACCATCCTCAGTTGTTAAACTTGACACCAAGTCTGGGAAGGTCACTACTGCTGAGCATGCTACAAACAATGCGGTTGAGAAGGTTCCCATTCCTTGTGTCAACAACATAACCAAAGGCCATGCTAATCAGCTTTCAAACTATGGTCATCATTTAGGAAACCTTGCATTAGCCTCTTCAGATACAAATTCCAAACAGTCCCCAAGCTATGTCTACCCCCCACCAGGAAACCAGTGGTTAGTTCCTGTCATGTCCCCATCTGAAGGCCTAGTATACAAGCCAATCATAGGGCCATGCCCTCCAAATGCAGGCTTCATGGCCCCCATATATGGCACTTGTGGTGCAGTGAGCTTCAATCCAGGAAGCAAGGATGCTTCTTCAGATGCAGCTTTTGCTCCAAATTCTCACCAAAAGTTTGGAATCCTTTCTGGTTCATCCTTACCCCAGTTCTTACCACCATTCATGCATCCATCTTCTATATCAGCTTCAGCTGTTGAGCAAATGGGGCAGTCTAATGGTCCTGAAAATCACCACTCATGTGGAGAAGTCAATTCTGCCATACTGTACCAAAGCTCATCTAACATGTCCAGCTCCACAAGTCAAGTAATGTCAAGAAACATTTCAACTTACCACTCACTGAAAGATAAAGAACTGCAGAGAAGCACAGCTAGCAGTCCCTCCAAGAGGATGAGTGGAGAAGTACTTCCTTTGTTTCCTTTGGCACCAACATTTTGGCAATCAGAAGATAGAAACACACAGGTTGAACAGCATTCACGAGTAATAAAAGCTATGCCTCACAATCCAAAATCAGCAACTGAATCAGCTGCAAGGATATTCAGGTCAATACAAGAAGAAAGGAAACATTTGTAA 2130 0.4155 MNRMRRGIEEGKEIGPMFPRLHVKDAEKGGPKAPPRNKMALHEQFSIPSQNYPPGSASLFPLPLRNYTGPPTSSSHISSSQSIQFCTSSAPSILAEKIQAYNSRKSNITKFTQDDFINSKNSLKTPDGKDAFITSGSSRGKNSCYSIIQNNKDEDKLARCNLSCSLRSLNSFRKKVNSPGAVELKSAQYEKSQMEEHTQVSQIGQKPEEGLTHSLDGFGDMTNASLVSLVNGNNSKSMNKEHRSLKEEIRSISVDSLKTLQGSSVHTHEEYAAFRDKINSRDHHIEKPAASDVHKCPGELELGRWCFLDKGDRNEDEETYRHYDALNKANSECTLAMDISPDNVVGAIGEQQFWKARRTIINQQKIFVMQVFELHRLIKKQVQRLIAGSPHILLEDNLLLNKPPPKTSTTKKFQSDFVGKKPSSVVKLDTKSGKVTTAEHATNNAVEKVPIPCVNNITKGHANQLSNYGHHLGNLALASSDTNSKQSPSYVYPPPGNQWLVPVMSPSEGLVYKPIIGPCPPNAGFMAPIYGTCGAVSFNPGSKDASSDAAFAPNSHQKFGILSGSSLPQFLPPFMHPSSISASAVEQMGQSNGPENHHSCGEVNSAILYQSSSNMSSSTSQVMSRNISTYHSLKDKELQRSTASSPSKRMSGEVLPLFPLAPTFWQSEDRNTQVEQHSRVIKAMPHNPKSATESAARIFRSIQEERKHL 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3282 709 PANTHER PROTEIN EARLY FLOWERING 3 4 709 IPR039319 GO:2000028
Ssu4g3282 709 PANTHER FLOWERING PROTEIN, PUTATIVE-RELATED 4 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3282 Ssu-Chr4 82616487 82621055 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3282 K12125 - gmx:100820110 1129.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3282 4 82616487 82621055 Ssu4g3282 4 82616487 82621055 ECH