Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3274 ATGAACAAGCATGGGAATGAAGAACCTGTTTTTGAAATTGGGGTGGTGGTTCCGAGGAGAATGGTGCAGGAAAAAGATGAATCATGTGACTGTGCATACGTCCTTGTAAAGGAGTTTGAGAAGGTGGGGTTTGTAGTTGAGAGAGTTATTGGCATTGCAGATGAGTTCATCAAGTTGGCTGCACCTTTGGAGACGTTGGGGAGGGCTGCAGCTGAACTACAAATCAAGAAACGGACTGTTATTGGTATGGATTTGCAATTTGACGTGGAGGAGGTGGAAGCTTTTGTGAAACAACCTGATGGTTCTGTTTTCAGTTGGTGTGAGCGTTTTCAGTGCTACTGTCACTTGATATATGGAATAGTAAACAACAGCAAGACAGCCAAAACCCTTAAATTTGATGGAAAAGAAATCAATTGGGCAATTGGGGAGAATCTGCTTCTGAAATTGGAATCAGAGAACATTGTTAAGCAAGTCTTTCCTTTGCATGatgaaaagaagagaaagaaacttCTCAGGAGTTGGGCACTTCATTGGTGGGACTTCACTAGTCAGCCAATTGATGAGATTTATTCATACTATGGGGCAAAGATTGCAATCTATTTTGCTTTTCTTGGAATGTACACACGGTGGCTGCTCTTCCCTGCTGCATTTGGGCTTACTTTGCAATTGATAGATTTTGGGTCATTGAAATTAGTGGTGCTCCCTGTTTTCTTTGTAATGGTGATACTTTGGGCTGTAATGTTTTCTCAGTTCTGGAAACGTAAAAATTCTGCACTTTTAGCCAGATGGCCTATTAGTTCTACAGTTGCAGCTGACCCAGTGTACAAGATTTCAGGCAGGAAGGCCAGCTCCTGGCAGCCCCCAATGGAACTCATAAGAGTATTTGAGTTTGACAGAGCTAAAGAGAAGGAAGTATTCCAGAGACATGAGTGGCTTGGGCGTCTCATGCGATTCAGAAATGATGCTATCATTATCTTCAGCATCATCTGCCTCCAGTTACCATTTGAGTTGGCATATGCTCATCTTTATGAAATTCTTGATTCTGATGTAATCAAGTTTGGGCTCACTGCTATTTACCTTTTCGCCATTCAGTATATTACCAAGATTGGTGGCAAGGTGTCTGTCAAACTTATCATGAATGAGAACAATGAAAACACAGAAAAACGGGCTGACAGCTTGGTCTACAAGGTGTTTGGTCTGTACTTTATGCAGACATACATTGGAATATTTTATCACGCCCTGTTGCATCGTAATTTTTCAACTCTTCGCCAAGTGTTGATTCAGCGGCTCCTTCTGTCTGAGGTTTTGGAAAACTTGTTGGAAAATTCATTGCCTTATCTCAAGTATAGCTATAAAAAGTATAGGGTTCGACACAAGAAGAAGAGTGAGAAAGGAGAAGCAAGAGAAAAAATCCAGTTTACTTCTAGAGTAGAGAAAGAATACCTTAAGCCTTCGTACTCTGCTAGCATTGGTGAGGAGCTTGAAGATGGGTTATTTGATGATTTCTTAGAATTGGCACTGCAGTTTGGAATGATTTTGATGTTTGCTTGTGCGTTCCCACCTGCTTTTGCTTTTGCTGCTGTGAACAACATCATGGAAATCAGGACAGATGCATTGAAGCTGCTAGCAATTTTGAGGCGGCCTGTTCCTCGTGCTGCTGCAACAGTAGGAGCCTGGCTTAACATATTTCAGtTTCTCATATTGATGTCTATATGCACCAACTGTGCTCTTTTAGCATGGCTATATGATGAGGAGGGAAAATGGAAAATAGAGCCTGGACTTGCAGCAATTTTAATCATGGAGCATGTCCTCTTGTTGATTAAGTTTGGTTTCTCTTGCTTCGTCCCTGAGGAACCTGCTTGGGTAAGAGCCAACCGTGCTAAACACACTACACAGGCACAGGATATGTGCTATAAAAAGCTTCTAAGGTCTATCTCAGGAGGAGACAGGACTTTAGGAGAGGAGAAAAAATTGGAATGA 1980 0.4141 MNKHGNEEPVFEIGVVVPRRMVQEKDESCDCAYVLVKEFEKVGFVVERVIGIADEFIKLAAPLETLGRAAAELQIKKRTVIGMDLQFDVEEVEAFVKQPDGSVFSWCERFQCYCHLIYGIVNNSKTAKTLKFDGKEINWAIGENLLLKLESENIVKQVFPLHDEKKRKKLLRSWALHWWDFTSQPIDEIYSYYGAKIAIYFAFLGMYTRWLLFPAAFGLTLQLIDFGSLKLVVLPVFFVMVILWAVMFSQFWKRKNSALLARWPISSTVAADPVYKISGRKASSWQPPMELIRVFEFDRAKEKEVFQRHEWLGRLMRFRNDAIIIFSIICLQLPFELAYAHLYEILDSDVIKFGLTAIYLFAIQYITKIGGKVSVKLIMNENNENTEKRADSLVYKVFGLYFMQTYIGIFYHALLHRNFSTLRQVLIQRLLLSEVLENLLENSLPYLKYSYKKYRVRHKKKSEKGEAREKIQFTSRVEKEYLKPSYSASIGEELEDGLFDDFLELALQFGMILMFACAFPPAFAFAAVNNIMEIRTDALKLLAILRRPVPRAAATVGAWLNIFQFLILMSICTNCALLAWLYDEEGKWKIEPGLAAILIMEHVLLLIKFGFSCFVPEEPAWVRANRAKHTTQAQDMCYKKLLRSISGGDRTLGEEKKLE 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3274 659 Pfam Calcium-activated chloride channel 189 628 IPR007632 -
Ssu4g3274 659 PANTHER NGEP-RELATED 3 646 IPR007632 -
Ssu4g3274 659 PANTHER BNAC06G23840D PROTEIN 3 646 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3274 K19327 - gmx:100817965 1190.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3274 4 82432686 82439589 Ssu4g3274 4 82432686 82439589 ECH