Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3271 ATGGGTAGCTCGGGAGAGTCGAACTTGAACGGAATCGATGCGTCGGTGggtgggttggtttgggtccGACGGCGAAACGGGTCGTGGTGGCCGGGTCGGATAATGGGTCTCCATGAATTGTCGGAGAGTTGTTTGGTTTCTCCGAGATCGGGCACTCCCGTCAAGCTCTTGGGTCGTGAGGATGCAAGCGTGGATTGGTATAATCTTGAAAAATCAAAGCGGGTAAAAGCTTTTCGCTGTGGAGAGTATGATGAATGCATTGAGAAGGCAAAGGCATCTGCTGCTAATTCAAACAAGAAGGCAGTGAAGTATGCCCGCAGGGAAGATGCTATTCTTCATGCTCTTGAGCTAGAGAGTGCTCACGTGGACAAGGAACCATTAAGCTTATGCTCCAGATTAGATAAACCTGGTAGTGAACATGGAGGATCAGCTGGAGAACTACTGCTCATGTCTAATTCTGGTGATGACAATGAGGATGCGACTGATGATCTGAGTGACTCTGATGATAATTCTAATTCAGCTCCAGAATTGTCACAATCTGGTATATCTTTTGAAGAGCCTAATCACAATGGTTCGTTAAAGATGCAATCTGTGCAAGGAAGGAGGAGAAGAACACCTAATGATTCAGAAGATGATGGATCTGAAGGAGTCAAGCGAATGAGAGGACTTGAGGACCTGGGCATTGGTGTGGTGTCAAAGAGAAAGGTCCAAGGTACAGGTGCAACTGAGATAGTTCAGCACATTAGTGCGTCACTCAACAATTCAACTGCAGGCAACTGCCTGGCAAATGGAACTTCTGTAAATGGTGGTAAAGGTTATTCTTCAACACTGAAAAGGAAGAGATCACAAGTGGCAAATGCTCATGAATTATTGAAAAGGAGAAATCGACGCCGGCCCTTGACTAAGGTTTTGGAGAGTACAGCCATGGTGTCAGTTCCTGTCATTTGTGATCAGCTTCCCAGTTCAAGCAGTTCTCCACTACGTGGGGTAACTGATGGAAGGATTTCAGGATTAGATTCTAATGATTCAAAGAAAACTTTTGCAATGACAACACATAATTCAGATAGTACTGAGGCTACTTGTGAGAATGGGACTTCATTAATTGTTCCTGACCATGGTAGTGATGCTTCCCAAATCAAGCACGGGGTCAAAGAGAATGAGACTTCTGGCATACCAGGGCTAGTTGGCAAAGATTCACCTGATAAACTATTTGATGTGCCATTTGTTGGAGTTCTAGGGGAGGAGAAAGACACTCCGGGTTTCTCACCTGTAATGGTTTCTTGTTCATCTGGCAAGCCTGAAGATAGTGCATTGGGACAACAGTCTTGTAATGCTAGTCAATGTGAAGCTGTGTCATTGAGAAATGAGATCAAGAATGAACCTGGTTGTACCAGTTCAGCTGCTGGTCACAATATTGTTGGCCATAAATCAGACAAAGGTAGTTCAAAGTGGCAGTCAAAAGGAAAGAGGAATTCAAGATatacaagtaaaaatataaaacaactcTCAAGAAAATATGAGGACACGGACCACCAATCCAGTGATTATTTGCCAGGAATAGGAAACTCAGATGGATTCTATCAGGGTACTGGTCAGAAAGCTGATTGGAATGGCATGGGTGCACCGAATACTTCATACAATACCTCTAAAGTTAAGTCCAAGCCTGTTGCTGAGGGCCAACTAGAAGAATTTCGGGACTTGAACAAGCGTATCAAGGGCACGACAGCAGAGGCAAAGCTATTACCTGATGGATCTCTCACACCTCAGAGATTACTTCCTTATCGCCATTCACGCTTCACTGTTAACTCCAGATATCAAATGGCAGATTTCCCTGGAAGAAATTATTGTTCTGATGCTTCATTGTATGATGTTAAGCTAGAAGTTAAGTCCAGCTACCGGCCACAACACGTACCTTTGGTTTCTCTTGTGAGTAAACTGAATGGCAAAGCTTTTATTGGACACCCTTTGACAGTTGAGGTTTTGGATGAAGGTCattgtgataaaatgttgaGTGGCATTGGATGCGACTTGGAAGCTAGTGATGTCTATTGTGTGGCCAAGCCAAACTCGGTTACCGGAAGAATACATTCCAAGAATTCAAGGCGTTTTTCACCTAGTAAATCTTCCAAGATGAAAAAAGCTGGGCTGTTGAATAAAAAGATTCGGAAATTGTCGTCATTGACAGGTCACAGGCAGTCAGAAGAGGAGAGAAAACCAGTGGTAGATAAGCTCAAGGGTCCTGTTATAGCTTGCATTCCCCTTCAAGTAGTATTCAGTAGGATAAATGAAGCAGTGAGTGGTCAGGCACGGTCCACACACCGGGCATTACCAACATCCAACCCATGA 2346 0.4318 MGSSGESNLNGIDASVGGLVWVRRRNGSWWPGRIMGLHELSESCLVSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEYDECIEKAKASAANSNKKAVKYARREDAILHALELESAHVDKEPLSLCSRLDKPGSEHGGSAGELLLMSNSGDDNEDATDDLSDSDDNSNSAPELSQSGISFEEPNHNGSLKMQSVQGRRRRTPNDSEDDGSEGVKRMRGLEDLGIGVVSKRKVQGTGATEIVQHISASLNNSTAGNCLANGTSVNGGKGYSSTLKRKRSQVANAHELLKRRNRRRPLTKVLESTAMVSVPVICDQLPSSSSSPLRGVTDGRISGLDSNDSKKTFAMTTHNSDSTEATCENGTSLIVPDHGSDASQIKHGVKENETSGIPGLVGKDSPDKLFDVPFVGVLGEEKDTPGFSPVMVSCSSGKPEDSALGQQSCNASQCEAVSLRNEIKNEPGCTSSAAGHNIVGHKSDKGSSKWQSKGKRNSRYTSKNIKQLSRKYEDTDHQSSDYLPGIGNSDGFYQGTGQKADWNGMGAPNTSYNTSKVKSKPVAEGQLEEFRDLNKRIKGTTAEAKLLPDGSLTPQRLLPYRHSRFTVNSRYQMADFPGRNYCSDASLYDVKLEVKSSYRPQHVPLVSLVSKLNGKAFIGHPLTVEVLDEGHCDKMLSGIGCDLEASDVYCVAKPNSVTGRIHSKNSRRFSPSKSSKMKKAGLLNKKIRKLSSLTGHRQSEEERKPVVDKLKGPVIACIPLQVVFSRINEAVSGQARSTHRALPTSNP 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3271 781 MobiDBLite consensus disorder prediction 462 537 - -
Ssu4g3271 781 PANTHER T17B22.17 PROTEIN-RELATED 1 777 IPR044679 -
Ssu4g3271 781 MobiDBLite consensus disorder prediction 131 220 - -
Ssu4g3271 781 MobiDBLite consensus disorder prediction 321 342 - -
Ssu4g3271 781 SUPERFAMILY Tudor/PWWP/MBT 14 119 - -
Ssu4g3271 781 PANTHER TUDOR/PWWP/MBT SUPERFAMILY PROTEIN 1 777 - -
Ssu4g3271 781 MobiDBLite consensus disorder prediction 167 200 - -
Ssu4g3271 781 MobiDBLite consensus disorder prediction 201 220 - -
Ssu4g3271 781 Pfam PWWP domain 18 107 IPR000313 -
Ssu4g3271 781 MobiDBLite consensus disorder prediction 515 530 - -
Ssu4g3271 781 Gene3D - 6 119 - -
Ssu4g3271 781 ProSiteProfiles PWWP domain profile. 16 71 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3271 Ssu-Chr4 82415749 82420486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3271 - - gmx:100817435 1360.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3271 4 82415749 82420486 Ssu4g3271 4 82415749 82420486 ECH