Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3270 ATGACGGACTACAAACAAGAACAGGATATGGAGATTGAAGCATTAGAAGCTATACTTATGGATGATTTCAAAGAAATACACTCTGGCGAAAGTGGCCTGGGTACTTCCAATCGGTGCTTCCAAATAAAGGTTGTTGCGCAGGATGATGATGCAGATGGGCCAATAACTAGTCCagCTCAACTGGCTCTGATCTTTTCACACACAGAAAGATATCCTGATGAACCtccacttttaaatttgaaaagTCTGCAAGGAATATCTGCTGAAGATCTAaggaatttgaaagaaaaacttCAACAAGAGGCATCTGAAAATCTTGATATGGCTATGATCTACACACTTGTTACTTCAGCTAAAGAGTGGTTGGCTGACCGGTTTTGTCAAGACTCTGTTGGTGGGAGTACTGAGGCAGAAGAGGCAGCCAAAGATGATATAGTGGTACCCCACGGGGAACCAGTTACTGTTGAAACATTTTTGGCATGGAGAGAAAGGTTTGAAGCTGAACTGGCATTGGAACGAGCCAAGCTAATGCCAGAGTCTGCGCTCACAGCTCCTAAGGAAAAGAAGCTCACTGGTAGACAGTGGTTTGAAAGTGGAAGAGCGAAAGGTGCAGCTGCTGTCAATGAGGAATCTGATGGGGAGGACGAGGAAGATATTGACTTTGATGAAGATGATTTTGAAGATGACGATGAAGAGGATATGCTTGAGCATTATCTGGCTGAAAAATCTGATTCATCCACACATTCTTCCAGGAGAGCTAGTTAA 765 0.4157 MTDYKQEQDMEIEALEAILMDDFKEIHSGESGLGTSNRCFQIKVVAQDDDADGPITSPAQLALIFSHTERYPDEPPLLNLKSLQGISAEDLRNLKEKLQQEASENLDMAMIYTLVTSAKEWLADRFCQDSVGGSTEAEEAAKDDIVVPHGEPVTVETFLAWRERFEAELALERAKLMPESALTAPKEKKLTGRQWFESGRAKGAAAVNEESDGEDEEDIDFDEDDFEDDDEEDMLEHYLAEKSDSSTHSSRRAS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3270 254 Gene3D Ubiquitin Conjugating Enzyme 1 128 IPR016135 -
Ssu4g3270 254 MobiDBLite consensus disorder prediction 236 254 - -
Ssu4g3270 254 PANTHER RWD DOMAIN-CONTAINING PROTEIN 1-RELATED 2 246 - -
Ssu4g3270 254 Pfam RWD domain 6 122 IPR006575 GO:0005515
Ssu4g3270 254 SUPERFAMILY UBC-like 1 124 IPR016135 -
Ssu4g3270 254 MobiDBLite consensus disorder prediction 210 235 - -
Ssu4g3270 254 Coils Coil 88 108 - -
Ssu4g3270 254 SMART RWD2001b 10 125 IPR006575 GO:0005515
Ssu4g3270 254 MobiDBLite consensus disorder prediction 193 254 - -
Ssu4g3270 254 PANTHER RWD DOMAIN-CONTAINING PROTEIN 2 246 IPR040213 -
Ssu4g3270 254 ProSiteProfiles RWD domain profile. 10 125 IPR006575 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3270 - - gmx:100788547 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3270 4 82397281 82404552 Ssu4g3270 4 82397281 82404552 ECH