Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3268 ATGTTGTTGCCAACCAGTGGAGTTGGGATGAATTCTGCAATGGATGATATGAATTTGATTCAGCAAACCCAGAGACATCACTTGGTTGTGAGAGAGATTGGTGAGGAGATTGATTTAGAAATCGGACCTGGGGAGGATGACCCTTCATTTGGTAACACTACTCTAATTGGTGCGCCGATGCGGGAATCTTCTGCAGAAGAACATGGTGAGAGCAAGCAGATGGGGATGGTTTCTCAGCTTCCTAATGATGCTCAAGATATGTCCAAGAACCAACAagtgaaaaggaagaaaaaggttGTTAAAAGATGGAGAGAAGAATGGGCTGACACCTATAAATGGGCTTACGTTGATGTGAAGGATGGGACACCGAGGATTTTCTGCTCTGTCTGCAGGGAGTACGGCCGGAAGCATAGAAGAAATCCTTATGGGAATGAGGGCAGTCGTAATATGCAGATGAGTGCCCTGGAAGAACACAATAATAGTTTGCTTCACAAAGAGGCTCTTCGTCTTCAAATGGCCTCCAAAGATAAAATTGTGGTCGACAAGCCTGTTTATGTAAAAGTTGCCATGTCAAAAACAGCGGGATCAATTCTTGAAGCTACGCTAAAAAGGGATCCTCATGAGGTTGAATTCATTCAGGCAGTACAGGAGGCAGTTCAAGCCCTTGAAAGAGTCATAGCAAAAAATTCTCGTTATGTTAACATCATGGAGCGCTTGTTGGAACCTGAACGAATGATTGTTTTTCGAGTTTCATGGATGGATGATAGGGGTGAGACACATGTAAATCGTGGCTTTAGGGTACAATTTAACCAGTCAATGGGTCCATGTAGGGGTGGTATTCGTTTTCATCCATCAATGAATTTAAGTGTTGCCAAGTTCCTTGGTTTTGAACAGACTTTAAAGAATGCCTTGTCACCATACAAATTAGGAGGAGCAGCCGGTGGAAGTGATTTTGATCCAAAAGGAAAAAGTGATAATGAGATTATGCGATTTTGCCAAAGTTTCATGAGTGAGATGTATCGCTACCTGGGGCCTGACAAGGACCTTCCGTCGGAGGAAATGGGTGTTGGTACTCGAGAAATGGGGTATCTTTTTGGACAGTATAGACGTCTAGCTGGTCATTTTCAGGGAAGTTTTACAGGGCCAAGGATATTTTGGTCTGGCTCCAGTCTTCGACCTGAAGCTACTGGCTATGGgctgGTTTTCTTTGCCCAGCTCATGCTTGCTGACATGAATAAAGAACTTAAAGGATTAAGGTGTGTTGTGAGTGGTTCTGGAAAGATTGCAATGCATGTTTTAGAGAAGCTAATTGCTTATGGTGCTCTTCCCATTTCAGTGTCAGATTCTAGAGGATATTTGGTTGATGAGGATGGATTTGACTAcatgaaaatatcatttttgagAGACATCAAAGCTCAACAAAGAAGTTTGCGAGACTATTCAAAGACCTATGCTCGGTCCAAATATTATGATGAAGCAAAACCGTGGAATGAAAGGTGTGATCTTGCATTTGCTTGTGCTTCACAGAATGAAATTGATCAATCTGATGCCATTAATTTGGTTAACTCAGGTTGCCGTATACTGGTAGAAGGTTCAAACATGCCTTGTACCCCTGAGGCAGTTCAGATTCTGAGGAAAGCTAGTGTTCTCATTGCTCCTGCAATGGCTGCTGGTGCTGGAGGGGTTGTGGCTGGAGAACTTGAACTGAATCATGAATGCAGTTTGATGCACTGGTCGCCAGAGGACTTTGAATCTAAATTGCAGGAAGCAATGAAACAGACTTATCAGAGAGCTATCAAGGCTGCAACTGATTTTGGTTATCAAAAAGAATGCCCTGAatattaa 1845 0.419 MLLPTSGVGMNSAMDDMNLIQQTQRHHLVVREIGEEIDLEIGPGEDDPSFGNTTLIGAPMRESSAEEHGESKQMGMVSQLPNDAQDMSKNQQVKRKKKVVKRWREEWADTYKWAYVDVKDGTPRIFCSVCREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQMASKDKIVVDKPVYVKVAMSKTAGSILEATLKRDPHEVEFIQAVQEAVQALERVIAKNSRYVNIMERLLEPERMIVFRVSWMDDRGETHVNRGFRVQFNQSMGPCRGGIRFHPSMNLSVAKFLGFEQTLKNALSPYKLGGAAGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDLPSEEMGVGTREMGYLFGQYRRLAGHFQGSFTGPRIFWSGSSLRPEATGYGLVFFAQLMLADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGALPISVSDSRGYLVDEDGFDYMKISFLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDLAFACASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVQILRKASVLIAPAMAAGAGGVVAGELELNHECSLMHWSPEDFESKLQEAMKQTYQRAIKAATDFGYQKECPEY 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3268 614 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 378 400 IPR006095 GO:0006520|GO:0016491
Ssu4g3268 614 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 420 440 IPR006095 GO:0006520|GO:0016491
Ssu4g3268 614 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 299 313 IPR006095 GO:0006520|GO:0016491
Ssu4g3268 614 PRINTS Glutamate/leucine/phenylalanine/valine dehydrogenase signature 557 568 IPR006095 GO:0006520|GO:0016491
Ssu4g3268 614 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 196 381 IPR046346 -
Ssu4g3268 614 SMART ELFV_dehydrog_3 389 609 IPR006096 GO:0006520|GO:0016491
Ssu4g3268 614 Pfam Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 388 605 IPR006096 GO:0006520|GO:0016491
Ssu4g3268 614 Pfam Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 242 369 IPR006097 GO:0006520|GO:0016491
Ssu4g3268 614 Gene3D Glutamate Dehydrogenase, chain A, domain 3 196 239 - -
Ssu4g3268 614 Gene3D - 394 559 - -
Ssu4g3268 614 Gene3D Leucine Dehydrogenase, chain A, domain 1 240 375 - -
Ssu4g3268 614 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 388 607 IPR036291 -
Ssu4g3268 614 PANTHER BNAA06G02140D PROTEIN 6 613 - -
Ssu4g3268 614 PANTHER NADP-SPECIFIC GLUTAMATE DEHYDROGENASE 1-RELATED 6 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3268 Ssu-Chr4 82371681 82384737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3268 218 515 EF-hand Containing Proteins AT5G07440 29.801 9.54e-33 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3268 K00262 - gmx:100788009 1185.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3268 4 82371681 82384737 Ssu4g3268 4 82371681 82384737 ECH