Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3262 ATGTCTGGAATTGTGGTTGTTTTCGACTTTGACAAGACCATCGTCGATGTCGACAGTGACAACTGGGTCGTCGACGAGTTGGGTTTCACCGATTTGTTCAACCAGCTCCTTCCCACCATGCCTTGGAACTCTCTCATGGACAGGATGATGATGGAACTTCATTCACATGGTAAAACCATTGAGGACATTGAAGAGTTCTGCATAGGATTCCCTTGCATCCCAGAGTGTGATTTGAGGATTGTGAGTGATGCGAACATGTTTTTCATTGAGACCATTTTGAAGCACTTGGGAATAAGGGAATACTTCTCGGAGATCAATACTAACCCGGGTTATGTTAATGAAGAAGGAAGGTTAAGGATTTTACCTTACCATGACTTCAACAAAGCTTCCCACGGCTGCAGTTTGTGCCCTCCAAACATGTGCaagGGTTTAATCATTGAAAGAATCCAAGATTCAATTTCGCAAGAGGATAACAAGAGGATCATCTATCTTGGTGATGGTAGTGGGGACTATTGCCCAAGCTTGAGGCTGAAAGAGAAAGACTTCATGATGCCAAGGAAGAACTTTCCCGTGTGGGACTTGATATGCAAAGACCCTTTGCTTATTAAGGCTGAAATCCATGGTTGGAGTGATGGAGAAGAGCTGGAGCAAGTTCTGTTGCACTTAATCAACAAAATTTCCATGGAGGAAAACGCTCAGTTCATTTCAGCTGATTGCAAGCTACGGACTCAGTCTGTCTCTGCTCATGAGGCTTTGCCTAAAGTCCTCCCAGTTCGGCCATAA 783 0.4419 MSGIVVVFDFDKTIVDVDSDNWVVDELGFTDLFNQLLPTMPWNSLMDRMMMELHSHGKTIEDIEEFCIGFPCIPECDLRIVSDANMFFIETILKHLGIREYFSEINTNPGYVNEEGRLRILPYHDFNKASHGCSLCPPNMCKGLIIERIQDSISQEDNKRIIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICKDPLLIKAEIHGWSDGEELEQVLLHLINKISMEENAQFISADCKLRTQSVSAHEALPKVLPVRP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3262 260 SUPERFAMILY HAD-like 4 178 IPR036412 -
Ssu4g3262 260 PANTHER INORGANIC PYROPHOSPHATASE 1 258 - -
Ssu4g3262 260 Pfam Putative Phosphatase 4 223 IPR016965 GO:0016791
Ssu4g3262 260 Gene3D - 2 177 IPR023214 -
Ssu4g3262 260 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 75 175 - -
Ssu4g3262 260 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 258 IPR016965 GO:0016791
Ssu4g3262 260 PIRSF PLP_phosphatas_PHOSPHO2 1 227 IPR016965 GO:0016791
Ssu4g3262 260 TIGRFAM DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 4 187 IPR006384 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3262 Ssu-Chr4 82204531 82206428 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3262 K13248 - gmx:100782134 481.485