Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3243 ATGTTTGCTCTAGTCTGCTTATGGTTTGGTATATCAGTGCCCTTGGTTTTTGTGGGCAGTTACTTGGGTTTTAAAAAACCAGCAATTGAAGACCCAGTGAAGACCAATAAAATTCCTAGGCAGGTACCTGAGCAGGCATGGTATATGAAACCTGTCTTCTCAATTCTTATTGGAGGCATTCTTCCATTTGGCGCAGTGTTTATCGAGCTCTTCTTTATCCTGACATCAATATGGCTGAACCAGTTCTATTACATCTTTGGCTTCCTTTTTATAGTGTTTGTTATCCTATTAATCACCTGTGCAGAGATTACCATTGTGCTTTGCTACTTCCAATTGTGCAGTGAGGATTACAATTGGTGGTGGAGATCTTACCTCACTGCTGGGTCCTCTGCTCTGTACCTTTTCCTCTACTCAATTTTCTACTTCTTCACGAAGCTGGAGATTACAAAGCTGGTCTCGGGCATCCTTTACTTTGGATATATGATAATTGTTTCATATGCCTTCTTTGTGTTGACGGGAACTATTGGCTTCTATGCTTGCTTCTGGTTTGTTCGCAAGATCTACTCCTCGGTGAAGATTGACTGA 585 0.4137 MFALVCLWFGISVPLVFVGSYLGFKKPAIEDPVKTNKIPRQVPEQAWYMKPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFIVFVILLITCAEITIVLCYFQLCSEDYNWWWRSYLTAGSSALYLFLYSIFYFFTKLEITKLVSGILYFGYMIIVSYAFFVLTGTIGFYACFWFVRKIYSSVKID 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3243 194 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 1 194 IPR004240 GO:0016021
Ssu4g3243 194 PANTHER TRANSMEMBRANE 9 SUPERFAMILY MEMBER 1 194 - -
Ssu4g3243 194 Pfam Endomembrane protein 70 1 150 IPR004240 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3243 Ssu-Chr4 81932035 81932619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3243 1 194 Miscellaneous Gene Families AT3G13772 94.330 1.02e-129 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3243 K17086 - gmx:100781403 373.629