Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3231 ATGGCGGTTGCGTCCATTCGCCTTCCACTCCTCTCTTTCGCTCCTCACCGCTCTTCATGTTCATGGCGTTGCCGTCCCTCTTCCATCATTGCTTTTTCTTCCATCCACTCCAGTTCTACTAAGGGAGATGGTGGAGTGGAGTTAGGTGGTGATCAAACAGAGATTATATTTTTGGGGACTGGAACCAGTGAAGGGGTTCCACGTGTTAGCTGCTTGACCAATCCTTTAAACAAATGTGAGGTGTGTTCTAAAGCTGCCCAACCGGGTAATAAGAATAGGAGACTTAACACAAGCATCCTCATTCGTCGCCCCAGTTCCTCAGGAGCACACAATATTCTTATAGATGCTGGAAAGTTTTTCTATCAAAGTGCTCTCCGGTGGTTTCCTGCTTTTGGGATAAGAACAATTGATGCGGTCATTATTACTCATTCACATGCTGATGCAATTGGAGGTCTTGATGATCTTAGAGATTGGACAAACAATGTTCAGCCTCATATTCCAATATATGTAGCCAAGCGTGACTTTGAGGTGATGAAGAAGACCCATTATTATTTAGTAGATACTAGTGTTATCTTAACTGGTGCCAAAGTCTCAGAGTTGCAATTCAATATCATATCGGAAGAACCATTTTATGTACACGGATTGAAGATTACCCCATTACCAGTGTGGCATGGCCAGGATTATCGGTCCCTTGGTTTTCGTTTTGGTAATATATGTTACATTAGTGATGTCAGTGAAATTCCTGAAGAAACTTATCCACTTTTAAAGGACTGTGAAATTCTAATCCTGGATGCTTTGAGGCCTGATCGCTCTACTTCCACACATTTTGGACTTCCAAGGGCCTTGGAGGAAGTGCGAAAAATTCAACCCAAAAGAACACTTTTTACTGGTATGATGCATCTGATGGATCATGAAGAAGTGAATGACTACCTTACGAAATTATTGCAGTCTGAGGGCCTTGATGCACAACTGAGCTATGATGGGCTTCGTATACCAGTCAGACTCTAG 1008 0.4276 MAVASIRLPLLSFAPHRSSCSWRCRPSSIIAFSSIHSSSTKGDGGVELGGDQTEIIFLGTGTSEGVPRVSCLTNPLNKCEVCSKAAQPGNKNRRLNTSILIRRPSSSGAHNILIDAGKFFYQSALRWFPAFGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQPHIPIYVAKRDFEVMKKTHYYLVDTSVILTGAKVSELQFNIISEEPFYVHGLKITPLPVWHGQDYRSLGFRFGNICYISDVSEIPEETYPLLKDCEILILDALRPDRSTSTHFGLPRALEEVRKIQPKRTLFTGMMHLMDHEEVNDYLTKLLQSEGLDAQLSYDGLRIPVRL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3231 335 SMART Lactamase_B_5a 95 298 IPR001279 -
Ssu4g3231 335 PANTHER OS09G0363800 PROTEIN 36 335 - -
Ssu4g3231 335 PANTHER HYDROLASE C777.06C-RELATED-RELATED 36 335 - -
Ssu4g3231 335 SUPERFAMILY Metallo-hydrolase/oxidoreductase 54 333 IPR036866 -
Ssu4g3231 335 CDD metallo-hydrolase-like_MBL-fold 54 265 - -
Ssu4g3231 335 Pfam Beta-lactamase superfamily domain 110 296 IPR001279 -
Ssu4g3231 335 Gene3D - 49 334 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3231 Ssu-Chr4 81640231 81644616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3231 - - gmx:100778396 597.816