Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3223 ATGACGACGTCTTCCGGTTCCATGAAGAACGCGATGCCCCCGGGCCTCCAAGAAGTGCTTCACAACAGAAAGCGCcccgaagaagaagaagaagaaggtgaCGGACCCAACAACAATGCTGAAGAACCCTCACTTTCACAGTCACAACAGCCCTCTTCATCCGCCGAGGACGCTGTTGCTGATAATAATATGTCAAAGCCCATTGTGTTGATCACCAACAGTGATGGCATTGAGTCCCCGGGTCTCACTTACCTCGTCGAAGCCCTTGTAAGCCAGGGCCTCTACGATGTTCATGTCTGCGTTCCTCAATCGGACAAATCGGTTTCGGGGCACTCTGTCACTTTTGGAGAAACCGTGGAAGCCTGTTCGGCCCAAATTAATGGTGCCACCGCCTTTGAAATTTCAGGAACTCCTGTGGATTGTGTTTCACTAGCATTATCTGGGGCCTTGTTTTCATGGTCAAAGCCTATGCTGGTTATTAGTGGAATTAACCGGGGATCAAGCTGTGGTCATCTCATGTTCTACTCAGGTGTTGTTGCTGGAGCAAGAGAGGCATTATTATGTGGTGTACCTTCGTTGTCGATATCATTAAATTGGAAGAAGGATGAAAGTCAAGAGACTGATTTCAAGGATGCAGTAGTACTCTGTTTACCATTAATAAATGCTGCTATCAGGGATGTTGTACAGGGAAATTTCCCCAAAAGCTGCTTTCTGAATATAGAAATTCCTACGTCGCCTTTAAGCAGCAAGGGTTTCAAATTGACCAAGCAAAGTATGTGGAGATCCACTCCAAACTGGCTGGCAGTTTCAACTAGCCGCTATCCTCCTGGTCATTTCTTGGCCAGTAAACAAGGCCTTGGTCTTCAGTTTGCACAGATTGGCCGAGATGCCTCTGCTGCTGGTGCAGCTCGTAGATTGACTACGCAGAAAAAGAATTTGGAGATTGTTGAATCAACTGGAGCTGCAGGGATACCTGATTCCAACAGGGTGAAGAAGTACTTCAGACTAGAGTTTTTGGATAAGCAGCAGGAAGATATAGATGACGATCTGGATTACAGGGCACTTGAAAGTGGATTTGTTGCAGTTACTCCGCTGTCTCTTTCTCCTCATACTGAGATGGATATTCAAATGGCTGCTTCTGATTGGATTTCATCTGTGTTTCCTGGTGAACAATAG 1176 0.4532 MTTSSGSMKNAMPPGLQEVLHNRKRPEEEEEEGDGPNNNAEEPSLSQSQQPSSSAEDAVADNNMSKPIVLITNSDGIESPGLTYLVEALVSQGLYDVHVCVPQSDKSVSGHSVTFGETVEACSAQINGATAFEISGTPVDCVSLALSGALFSWSKPMLVISGINRGSSCGHLMFYSGVVAGAREALLCGVPSLSISLNWKKDESQETDFKDAVVLCLPLINAAIRDVVQGNFPKSCFLNIEIPTSPLSSKGFKLTKQSMWRSTPNWLAVSTSRYPPGHFLASKQGLGLQFAQIGRDASAAGAARRLTTQKKNLEIVESTGAAGIPDSNRVKKYFRLEFLDKQQEDIDDDLDYRALESGFVAVTPLSLSPHTEMDIQMAASDWISSVFPGEQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3223 391 PANTHER 5'-NUCLEOTIDASE SURE 8 391 IPR030048 GO:0008252
Ssu4g3223 391 PANTHER 5'-NUCLEOTIDASE SURE-LIKE 8 391 - -
Ssu4g3223 391 MobiDBLite consensus disorder prediction 39 59 - -
Ssu4g3223 391 MobiDBLite consensus disorder prediction 1 59 - -
Ssu4g3223 391 Pfam Survival protein SurE 69 261 IPR002828 GO:0016787
Ssu4g3223 391 Hamap 5'/3'-nucleotidase SurE [surE]. 67 387 IPR030048 GO:0008252
Ssu4g3223 391 SUPERFAMILY SurE-like 68 371 IPR036523 GO:0016787
Ssu4g3223 391 Gene3D - 69 387 IPR036523 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3223 Ssu-Chr4 81544743 81550424 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3223 K03787 - gmx:100776267 603.979