Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3222 ATGGCGTCTCTGAGAAGTGGAGCTTCGTTGTTGAATTGCCTATCGAAATCGCTTCTCCATTCCAACAACCCCAAACTTCAATCACACCTATTATTCCCTTCTCTCTCTAGGCTCCCCGGTGCGATTTCTCCCCAAAACGACGTCGAATTCCCCAACAAACAAGGCTTTCTCTACCCATGTGGCCTCCCCTCTCTCCGCTTCTTCTTACCTCATGGGGACGCTCCTTCGTCAGATGATCCCATGCTTTTATTCCCCAAAAGGACATTTCAACCCAGCCTTATTCGTCGAAAGAGGAACCATGGATTTTTTGCTCGGAAAGCAACCAAGGGTGGCAGAAGAGTAATTGCTCGGAGAATAGCCAAGGGCCGTTTTAGGATTACAGCTTAG 387 0.4858 MASLRSGASLLNCLSKSLLHSNNPKLQSHLLFPSLSRLPGAISPQNDVEFPNKQGFLYPCGLPSLRFFLPHGDAPSSDDPMLLFPKRTFQPSLIRRKRNHGFFARKATKGGRRVIARRIAKGRFRITA 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3222 128 TIGRFAM rpmH_bact: ribosomal protein bL34 86 128 IPR000271 GO:0003735|GO:0005840|GO:0006412
Ssu4g3222 128 Hamap 50S ribosomal protein L34 [rpmH]. 85 128 IPR000271 GO:0003735|GO:0005840|GO:0006412
Ssu4g3222 128 PANTHER RIBOSOMAL PROTEIN L34 16 128 - -
Ssu4g3222 128 ProSitePatterns Ribosomal protein L34 signature. 86 105 IPR020939 GO:0003735|GO:0005840|GO:0006412
Ssu4g3222 128 Pfam Ribosomal protein L34 86 128 IPR000271 GO:0003735|GO:0005840|GO:0006412
Ssu4g3222 128 Gene3D - 84 128 - -
Ssu4g3222 128 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN 34 FAMILY MEMBER 16 128 IPR000271 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3222 K02914 - gmx:100809386 222.631