Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3217 ATGAAGGTGAAAATTGTTGGGGTTTTTAACTCTGACAAGAAAACTGAATCTCTTGCTTGTGAAGCAAAATCTCTCGGCCAATGCAAAGTAAGGAGGCCGTTTCTTCCAGCCCAAAAAGAGGCTCTACAGTCTCCACCACCATATACTATAGAATCAAAAAGGTGTGGTTTCATGGGCATAGAAGGTAGGTCAGAAACAATGCAGGAAGCATATGACGGAGGAGTGAGCAAAATAGGGTCAAGTCCACCAAGTTGTGAGCACAAGTGCTATGGTTGCGTCCCATGTGAAGCCATCCAAGTTCCCAGCACGAGCACCAGGCGCAGCCATTTGGGCATACAGTATGCAAACTACGAGCCCGAGAGCTGGAAATGCAAGTGTGGTCCCTCCTTCTATAGCCCGTGA 402 0.4751 MKVKIVGVFNSDKKTESLACEAKSLGQCKVRRPFLPAQKEALQSPPPYTIESKRCGFMGIEGRSETMQEAYDGGVSKIGSSPPSCEHKCYGCVPCEAIQVPSTSTRRSHLGIQYANYEPESWKCKCGPSFYSP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3217 133 Pfam Epidermal patterning factor proteins 77 133 - -
Ssu4g3217 133 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 58 133 IPR039455 GO:0010374
Ssu4g3217 133 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 3 58 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3217 Ssu-Chr4 81468247 81469324 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3217 - - gmx:100783024 199.134