Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3203 ATGGTTGATAGCAATCCTTCCTCTGGATCACCTGAAGAAACACCAAATCCCAACCCAGATGGGAATGCACCTTCTGAAAGTGATCTTGCATTGGATAATCTAGCACAAAAAGTTCAAGAATCTCTCTCTCTGgaaaaaagacataaattttGGGAAACCCAACCTGTCGGGCAGTTCAAGGATATAGGGGACTCCAGTTTGCCAGAAGGCCCTATTGAACTTCCGACCCCCGTATCTGAGGTCAAACAAGAACCATACAACCTTCCTGACCACTATGAATGGGTTACTTGTGACATCAACTCTGAGGAGATGTGTGATGAGGTATACAACCTTCTTGCTCATAATTATGTTGAGGATGATGAGAACATGTTTCGATTTAACTACTCAAAGGAATTTCTGCGCTGGGCTCTGCAACCTCCTGGTTATTTCAGGAGTTGGCATATTGGTGTCCGTGTTAAAAGTTCCAAGAAGATGGTTGCCTTTATAACAGGCATTCCTGCTAGAATCCGAGTTCGTGATGAGGTTGTTCATACGGCAGAGATCAATTTTCTGTGTGTCCATAAGAAACTTCGAACAAAGAGGCTTGCTCCTGTCATGATCAAAGAGGTGACCAGGAGGGTGCACCTGGAAAATATGTGGCAGGCAGCCTACACTGCTGGAGTAATTCTTCCTACACCAATAGCAACTTGTCAATACTGGCACAGATCTTTGAATCCCAAGAAGCTAATTGATGTTGGTTTCTCTCGGCTTGGTGCACGAATGACAATGAGTCGAACCATTAAGCTTTACAAGCTACCAGAATCAACAATCACCCCAGGGTTTAGAAAGATGGAAATTCATGATGTTCCTGCAGTTACAAGGTTAATTAGGAATTATTTGAGCCATTTTGTTGTTGCACctgattttgatgaaaatgatgtGGAGCATTGGCTTCTGCCAAAGGAAAACGTTATTGATAGTTATCTGGTTGAAAGTCCTGAAACTCACGAGGTCACTGACTTTTGTAGCTTTTATACACTTCCTTCTAGTATTCTTGGCCaccaaaattattcaattttgaaagcagcatattcattttataatgtTTCCACGGTCACTCCTTTGCTTCAGCTGATGAATGATGCTCTCATTGTCGCAAAACAGAAGGATTATGATGTTTTCAATGCATTGGATGTCATGCAGAATGAGACCTTCTTGAGGGAATTGAAGTTTGGACCAGGTGATGGGAAACTTCATTATTATCTTTACAACTACCGAATAAGGCATGCATTGAAGCCGTCAGAGCTTGGGCTTGTGCTTCTGTAG 1305 0.4038 MVDSNPSSGSPEETPNPNPDGNAPSESDLALDNLAQKVQESLSLEKRHKFWETQPVGQFKDIGDSSLPEGPIELPTPVSEVKQEPYNLPDHYEWVTCDINSEEMCDEVYNLLAHNYVEDDENMFRFNYSKEFLRWALQPPGYFRSWHIGVRVKSSKKMVAFITGIPARIRVRDEVVHTAEINFLCVHKKLRTKRLAPVMIKEVTRRVHLENMWQAAYTAGVILPTPIATCQYWHRSLNPKKLIDVGFSRLGARMTMSRTIKLYKLPESTITPGFRKMEIHDVPAVTRLIRNYLSHFVVAPDFDENDVEHWLLPKENVIDSYLVESPETHEVTDFCSFYTLPSSILGHQNYSILKAAYSFYNVSTVTPLLQLMNDALIVAKQKDYDVFNALDVMQNETFLRELKFGPGDGKLHYYLYNYRIRHALKPSELGLVLL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3203 434 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 2. 403 409 IPR022678 GO:0004379
Ssu4g3203 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 46 231 IPR016181 -
Ssu4g3203 434 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 232 434 IPR016181 -
Ssu4g3203 434 Gene3D - 39 434 - -
Ssu4g3203 434 PIRSF N-myristl_transf 18 434 IPR000903 GO:0004379|GO:0006499
Ssu4g3203 434 PANTHER N-MYRISTOYL TRANSFERASE 8 434 IPR000903 GO:0004379|GO:0006499
Ssu4g3203 434 MobiDBLite consensus disorder prediction 1 38 - -
Ssu4g3203 434 ProSitePatterns Myristoyl-CoA:protein N-myristoyltransferase signature 1. 180 188 IPR022678 GO:0004379
Ssu4g3203 434 MobiDBLite consensus disorder prediction 1 23 - -
Ssu4g3203 434 Pfam Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain 244 422 IPR022677 GO:0004379
Ssu4g3203 434 Pfam Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain 71 230 IPR022676 GO:0004379
Ssu4g3203 434 PANTHER GLYCYLPEPTIDE N-TETRADECANOYLTRANSFERASE 8 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3203 Ssu-Chr4 81134235 81135539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3203 1 434 Acyl Lipid Metabolism Gene Families AT5G57020 78.341 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3203 K00671 - gmx:100817419 865.144