Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3174 ATGATGAATCAAGGTGGatccaaagaagagataaaagggtggagaaaatttttaacaaatgtaATGTGTTGGCcggaaaatatcaaaaataaggAGAAATGGTTTGAGCACATGGGGGGGATGCTAAGTTTGGTGGCTACCGTAATCGCAACTATAACCTTTCAAAGTGCTATTAATCCACCAGGTGGCGTTAGGCCCGCAGAAAGTTTCGCAAATGAGACAGAAGTTGTCAAATGTAACGATACAATAATACCATGTCCTGGACAAGCTATCCTAGCTGTTGTTTACCCAAACACTTATACCATCTTCCTTTTTATGAACACCATATGTTTCGTTTCATCTTCAGCTGTTTGTCTCTTGCTTGTAAGTGGACTCCCTCTGCATAACCGATTTCTCACCTTGCTTTTCTCGGTATGCATGTGCATCACCCTCACCAGCCTCACTCTCACCTATTTGTTTGGTGCGAAAATGGTCACCCCAGATAACCTTTGGGGTCGAGTCATCTCCATGGTTGGAATAGTTATTGTTATTTGGATGATACTACTAGCACTGGTCACATTTTGTGTTTGCCTACCCCAACTTGTTTCGATTGTGAATAAATGGACTGGCAGAGGTAATCAACAAGATCCAACCCCTCAAGATCAAACCAAACCAGATCCAACCCCAGAAGATCAAACCTAG 681 0.3921 MMNQGGSKEEIKGWRKFLTNVMCWPENIKNKEKWFEHMGGMLSLVATVIATITFQSAINPPGGVRPAESFANETEVVKCNDTIIPCPGQAILAVVYPNTYTIFLFMNTICFVSSSAVCLLLVSGLPLHNRFLTLLFSVCMCITLTSLTLTYLFGAKMVTPDNLWGRVISMVGIVIVIWMILLALVTFCVCLPQLVSIVNKWTGRGNQQDPTPQDQTKPDPTPEDQT 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3174 226 PANTHER CASKIN 12 166 - -
Ssu4g3174 226 MobiDBLite consensus disorder prediction 205 220 - -
Ssu4g3174 226 MobiDBLite consensus disorder prediction 205 226 - -
Ssu4g3174 226 PANTHER - 12 166 - -
Ssu4g3174 226 Pfam Domain of unknown function 32 155 IPR026961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3174 Ssu-Chr4 80308539 80309219 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3174 - - pvu:PHAVU_010G133800g 224.172