Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3159 ATGGTCCCTGGTTCCAGAGCGGAGGGTGGTACTGGTACCCACTTGCTCTCTGCGGGAGTGCGCAAAACCATTCAATCCATCAAGGAAATCGTGGGGAATCATTCTGATGCTGATATCTATGTCGCCCTTAAGGAAACCAACATGGATCCTAACGAAACCGCTCAGAAATTGCTCAACCAAGATCCATTTCATGAGGTGAAGAGAAGGAGAGACCGAAAGAAGGAGGCTCAGAATGTTGGGAACAATGGTTCAGCTGACTCACGAATGCAGTCTGAGAATAGTGGTCAAGCAATGAAATTTCACACCCCTTCTGAACGCAATGTTCGAAGAACTAACTATTCTCGGAGTACTTTACCTGGCATAAGCAGAGAGTTCCGTGTTGTTAGAGACAACAGAGTaagtcatatatataaagaagtaaAGCCTCTTTCACAGCAGCACTCAACATCCACCACTGAGCAATTAACTCTAAACACATCTAAAAAGGGCTCATCAGCTTCCACCAATCATAGGTCATCTGGTGCTAGGAATTCATCTCAAGCACCAAATGGTCCTTCTGATTCACATGCTAGGTACTCGAAAGATGCTGtttcaaatattattgacaGAAAAATTGCATCTGAGGATAAGGATAAGCAAGGCATGATTTCAAATGCTGCAGCGGGACGGGTGCAACCAATTAAGCCTAACAACATCCATCAAAATTCTGCATCAGTGGCATCAACCAGTTCTGCTGTTGGGGTGTATTCCTCTTCAACAGATCCAGTTCATGTGCCCTCTCCTGATTCTAGATCATCAGGTGTTGTTGGAGCCATTAGGCGTGAAGTTGGGGTGGTTGGTGTTCGGCGACAGTCTTCAGACAACAAAGTAAAACAATCGTTTGCTCCTAGTAGCTCTTATGCTAATTCTCTTGGGGGAAAAGATGGTACATCTGCAGATTCTTTTCAATCAGTTGGTGCTGTCTCAAAGACTCAACAGTTTAGTCAAACTAATGTAACTGAACCTTCATTATCTGGTATGCCAGTTAGCAGACCGTCTCTGAACAACCAGTATAATAGTAGGCCACATCAGCAACTTGTGGGACATCAAAGAGTTTCCCAGCATAATAAAGAGTGGAAACCTAAGTCAAGCCAGAAGTCAAACAGTAATAATCCTGGAGTAATTGGAACCCCCAAAAAGGCTGCTGCTTCTGCTTCACCTCCTGCAGAAAACTCTGGAGATTTAGAATCAGATACAGCAGAGCTTCAAGATAAATTTTCCcaagtaaatatatatgagaACCAAAATGTTATTATAGCGCAGCATATTCGAGTTCCGGAGACTGATCGCTGTCAGCTGACCTTTGGTACCATTGGGACCGAACTTGATTCTTCAAAGCTTCAATCTAAGTATCACTTAATAGGAGcttctgaaaaatcaaatgaGGAATTGACTGCAAGCTTGACAGTACCTGCTCCAGAGTTGTCCACTGATGATGTTTCTGGGAGCAAACAGGTGGACTTACAGGATGACCACATTAGAAGTTCTGGGTCAGACTCTCCTGCATCTGGTGCTGCTTCCGAGCAACAATTGCCTGATATCAAAGACTCTTCAAACACTCAGAATCTGGACAATTATGCCAATATTGGATTGGTACGTGATAGTAGTCCATCCTATGCACCTTCAGAATCACAGCAGCAAGATTCTCATGACATGCCAGGCTTTGCGGCGTACGATCCTCCAACTGGTTACGACATTCCTTATTTCAGACCCACTATTGATGAAACCATACGAGTGCAGGGTTTTTCATCTCCTCAGGagGCTTTGATCTCTCATGCAACCAATAATACTCCTGCTTCCACAATTGCCATGATGCAACAACAGCAACCTCCTGTGGCTCAGATGTATCCACAAGTTCATGTTTCACACTTTGCTAATCTTATGCCTTATCGTCAGTTTCTGTCCCCAGTCTATGTTCCACCTATGGCCATGCCTGGATATTCTAGTAATCCTCCCTATCCTCACCCAACAAATGGCAGCAGTTACTTGTTAATGCCTGGAGGTGGTTCCCATCTTAATGCCAACAACCTCAAATATGGAGTTCAACAGTTCAAGCCCGTTCCTGCTGGAAGTCCTACAGGGTTTGGAAATTTTGCTAACCCAACTGGATATGCCATGATAACTCCTGGTGTGGTTGGGGGTGCGACAGCTTTAGAAGATTCATCTCGAGTCAAGTACAAAGATAATCTTTATGTCCCAAATCCTCAGGCTGAGACATCAGAAATCTGGTTACAGAATCCAAGGGATCTTCCTGGCATGCAATCTACTCCATACTATAACTTGCCAGGCCAAACACCTCATGCAGCTTACATGCCATCACACACTGGTCATGCTTCCTTCAATGCAGCTGCAGCTCAGTCTTCTCACATGCAGTTCCCTGGCATGTACCATACTCCTCCTCAGGCAGCAGCCATTCCCAGTCCTCACCATTTAGGACCACCAGCCATTGGCAATAATGTTGGAGTTGGGGTGGCTGCAGCTGCTCCTGGAGCACAGGTTGGTGCATATCAGCAGCCCCAATTGGGCCACATCAATTGGACGACAAATTTCTGA 2592 0.4414 MVPGSRAEGGTGTHLLSAGVRKTIQSIKEIVGNHSDADIYVALKETNMDPNETAQKLLNQDPFHEVKRRRDRKKEAQNVGNNGSADSRMQSENSGQAMKFHTPSERNVRRTNYSRSTLPGISREFRVVRDNRVSHIYKEVKPLSQQHSTSTTEQLTLNTSKKGSSASTNHRSSGARNSSQAPNGPSDSHARYSKDAVSNIIDRKIASEDKDKQGMISNAAAGRVQPIKPNNIHQNSASVASTSSAVGVYSSSTDPVHVPSPDSRSSGVVGAIRREVGVVGVRRQSSDNKVKQSFAPSSSYANSLGGKDGTSADSFQSVGAVSKTQQFSQTNVTEPSLSGMPVSRPSLNNQYNSRPHQQLVGHQRVSQHNKEWKPKSSQKSNSNNPGVIGTPKKAAASASPPAENSGDLESDTAELQDKFSQVNIYENQNVIIAQHIRVPETDRCQLTFGTIGTELDSSKLQSKYHLIGASEKSNEELTASLTVPAPELSTDDVSGSKQVDLQDDHIRSSGSDSPASGAASEQQLPDIKDSSNTQNLDNYANIGLVRDSSPSYAPSESQQQDSHDMPGFAAYDPPTGYDIPYFRPTIDETIRVQGFSSPQEALISHATNNTPASTIAMMQQQQPPVAQMYPQVHVSHFANLMPYRQFLSPVYVPPMAMPGYSSNPPYPHPTNGSSYLLMPGGGSHLNANNLKYGVQQFKPVPAGSPTGFGNFANPTGYAMITPGVVGGATALEDSSRVKYKDNLYVPNPQAETSEIWLQNPRDLPGMQSTPYYNLPGQTPHAAYMPSHTGHASFNAAAAQSSHMQFPGMYHTPPQAAAIPSPHHLGPPAIGNNVGVGVAAAAPGAQVGAYQQPQLGHINWTTNF 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3159 863 MobiDBLite consensus disorder prediction 141 187 - -
Ssu4g3159 863 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 863 - -
Ssu4g3159 863 MobiDBLite consensus disorder prediction 283 411 - -
Ssu4g3159 863 MobiDBLite consensus disorder prediction 285 365 - -
Ssu4g3159 863 Pfam GBF-interacting protein 1 N-terminal 18 75 IPR009719 -
Ssu4g3159 863 MobiDBLite consensus disorder prediction 61 115 - -
Ssu4g3159 863 SUPERFAMILY UBA-like 19 77 IPR009060 GO:0005515
Ssu4g3159 863 MobiDBLite consensus disorder prediction 78 102 - -
Ssu4g3159 863 MobiDBLite consensus disorder prediction 248 269 - -
Ssu4g3159 863 MobiDBLite consensus disorder prediction 61 77 - -
Ssu4g3159 863 MobiDBLite consensus disorder prediction 139 193 - -
Ssu4g3159 863 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 863 - -
Ssu4g3159 863 MobiDBLite consensus disorder prediction 508 564 - -
Ssu4g3159 863 MobiDBLite consensus disorder prediction 504 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3159 Ssu-Chr4 80041452 80053394 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3159 - - gmx:100807606 1498.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3159 4 80041452 80053394 Ssu4g3159 4 80041452 80053394 ECH