Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3155 ATGGAAACTGTGGTTGGAATTGAGGATAATGATGATGGGAAGTTTGAAGACAGTGGGGTTGATAGAAGCAGTTCTGCTTTGTCTTCACCGAAGCAAATTTCCAACCCAATTGTATACAAGCTTGTTCGGGTTGAAGGTGATGGGAGGTTAGTGCCTGCAACAGATGATGAAGTGATGGAGGTGGGGGATTTTCTTGAGTATGAAAGCAGTGAAATGCATGTTGTTGCAGACACCGGGCAGAGTTTGGAATGCATATCAATTGAAAGATCATCTTCTGGGAAGCTTCGATTGGAGTGCTCAGAAGGCACTGCAGAGGCGGATTTGGGGAAACTAAATGCAAAATTACAGTACATTGAGCAGATTTTGCAAAAGGTCaaacaagaagagaaacaaCGCATATCATGTGGATCACCTGTTCATTCTCATGTAAATACAGACAGCCAGTGTTCAGCTGATAAAGTTCCTGTCATGGATGGGAAGGTTCAATCTGAAACTCCCCACCAGGAAATCCCTTCTATAGCATCGAGTTTAAATTATACTCATAGTAATCAATCTGGGAGTATTGATCACTGTTCCAGACCTTCAGAAGGAGTAATTGAAAGTGGATCATCTGCTTCTGCTGTCCATTCCAACTTGAGGCCTGATTTTTCAATGTCAGACGGAGAAATATGCTTGGAAAAGCTATCAATCAGAGAACTTCATGAACTGTTTAAGGTAACTTTTGGTCGGGAAACTACTGTGAAAGACAAACAGTGGCTGAAAAGGAGGATTGCCATGAGTTTAACCAACTCTTGTGATGTTTCAGCAACAACTTTCattattaaagataacaaaatagttAGAAAATTTGAAGAAGACAGTTCTGGAAATATGAATGCTGCATCTTTAATCTCTCCAGAAAATATGACTGAAGAAGAGGACGTCAACTTTAAGGATTCATCTGCTGTAAAAGCTTGTGGAATTGATGATAACCAAGTTGTTTCTGAAACAAGACTGAGAAATCACAATATGGGATATGGATTGGAAGGTGAGAATCATCAGACAGAACAAAGAGCTGCAAAAAGAATACGGAAACCTACTAAGAGATATATTGAAGAGCTCTCTGAAAATGAATCCAGAGAGCACAATCCTAGGTtgttaatttctaataaaaatatgggACTTGGACATGTTTCTCCAACTTCGTATGTCAGGCCTGCTAGAAATGCTTTTTCAGAGGTGAGAACATATGTCACCAGGTTCGACTCTCTTGGAGGTTCTGATTTCCAAATTCCTTGTGTGTCTCGGGTTCGGAGAAGTCGTCCAAGAAAAGATGTCGCGTCTCTTATAAAATTCCACCCCACTGGCATGGGTGAGGCTGCAAATTTGAGTAATAAGCACCTTGAGCATAGTTCTGATGCTGGTAGTGAGATTCCAGACAAAGTTTTGAAGTCAAGAATGGCTGCAAAGTTTCATCAACCATCTGCTTCTGAACCTGCGAAAGAGAAGCAGTGTCCAGTAACAGGCACAATTGAGCTACGGCAGGAATTGAGGCCAAAAAAGGCAGATCCATTTAGCCATACTTCTGATGACGATATAGTTACTGTTCCCACTGCTAAAGGAGGGATGAGGAGGAAGCATCATCGTGCATGGACTCTTGTTGAGGTGATAAAATTGGTCGAAGGTGTGTCACGGTGTGGAGCAGGGAGGTGGTCTGAAATCAAACGGCTCTCCTTTTCATCATACTCATATCGTACCTCTGTTGATCTTAAGGACAAGTGGAGGAATTTGCTCAAAGCTAGCTTAGCACTGACACCTGCACCTGCAGATGAGGGGATAAATTCGCGGAAGCATGGTACGGCTCCCATTCCTGAGAAAATTTTGCTACGTGTAAGAGAGCTTGCTGAGATGAATTCACAGGTGCCTCCAAATTTTAGCTCAAGCAAGTTAGCAGCTGGTGCAGGGAGTGTGCATGGAGATAGATCGGGgtacttgtaa 1977 0.4133 METVVGIEDNDDGKFEDSGVDRSSSALSSPKQISNPIVYKLVRVEGDGRLVPATDDEVMEVGDFLEYESSEMHVVADTGQSLECISIERSSSGKLRLECSEGTAEADLGKLNAKLQYIEQILQKVKQEEKQRISCGSPVHSHVNTDSQCSADKVPVMDGKVQSETPHQEIPSIASSLNYTHSNQSGSIDHCSRPSEGVIESGSSASAVHSNLRPDFSMSDGEICLEKLSIRELHELFKVTFGRETTVKDKQWLKRRIAMSLTNSCDVSATTFIIKDNKIVRKFEEDSSGNMNAASLISPENMTEEEDVNFKDSSAVKACGIDDNQVVSETRLRNHNMGYGLEGENHQTEQRAAKRIRKPTKRYIEELSENESREHNPRLLISNKNMGLGHVSPTSYVRPARNAFSEVRTYVTRFDSLGGSDFQIPCVSRVRRSRPRKDVASLIKFHPTGMGEAANLSNKHLEHSSDAGSEIPDKVLKSRMAAKFHQPSASEPAKEKQCPVTGTIELRQELRPKKADPFSHTSDDDIVTVPTAKGGMRRKHHRAWTLVEVIKLVEGVSRCGAGRWSEIKRLSFSSYSYRTSVDLKDKWRNLLKASLALTPAPADEGINSRKHGTAPIPEKILLRVRELAEMNSQVPPNFSSSKLAAGAGSVHGDRSGYL 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3155 658 Gene3D - 531 639 - -
Ssu4g3155 658 PANTHER TRF-LIKE 3 1 658 - -
Ssu4g3155 658 MobiDBLite consensus disorder prediction 1 30 - -
Ssu4g3155 658 PANTHER MYB-LIKE DNA-BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 1 658 - -
Ssu4g3155 658 Coils Coil 108 128 - -
Ssu4g3155 658 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 536 595 IPR017930 -
Ssu4g3155 658 CDD SANT_TRF 542 592 - -
Ssu4g3155 658 ProSiteProfiles Myb-like domain profile. 544 591 IPR001005 -
Ssu4g3155 658 Pfam Myb-like DNA-binding domain 543 591 IPR001005 -
Ssu4g3155 658 SMART sant 540 593 IPR001005 -
Ssu4g3155 658 SUPERFAMILY Homeodomain-like 542 601 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3155 Ssu-Chr4 79918575 79926105 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3155 - - gmx:100775511 1120.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3155 4 79918575 79926105 Ssu4g3155 4 79918575 79926105 ECH