Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3144 ATGGATTCGACATTTTCGCCCTTTGGTTTTGTGATTTTCGGTATTTCCATCAGCTTTTATGCATTTATTGTCCAATCACAGACACAAAATGGGGAAAATGGCACTGAATCAGCATCACCGGAGTTTATGGTGTCAAGTCCACCGCCACCGCCGCCgccacctcctcctccgccaccgccaccgccaccaccacctcctCTGCCGTCACAACATCCTCCGCTGCCCCATCGTAACCATAAGCCCAAGATGAGAAGATCGCCGCCGCACCCTCACCCTCACCCTCCCTGCTACAGCCACTTACCTCCGCCGCCACCACCGCACAAGATGAATGCCGGGAAAAAGGTTGGACTTTTGTTTGTGGTCATTGCGGCGATCATGCAAGTGGGCATGGTTGGGTTCTTGGTAATTAAGAGACGGCAACTTTTGAAGAGCGATGGCAATAGATACGAAAATTGTTCTTGA 462 0.4524 MDSTFSPFGFVIFGISISFYAFIVQSQTQNGENGTESASPEFMVSSPPPPPPPPPPPPPPPPPPPPLPSQHPPLPHRNHKPKMRRSPPHPHPHPPCYSHLPPPPPPHKMNAGKKVGLLFVVIAAIMQVGMVGFLVIKRRQLLKSDGNRYENCS 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3144 153 PRINTS Proline rich extensin signature 47 59 - -
Ssu4g3144 153 PRINTS Proline rich extensin signature 88 104 - -
Ssu4g3144 153 PRINTS Proline rich extensin signature 61 82 - -
Ssu4g3144 153 MobiDBLite consensus disorder prediction 75 89 - -
Ssu4g3144 153 PANTHER PROLINE-RICH FAMILY PROTEIN 1 153 - -
Ssu4g3144 153 MobiDBLite consensus disorder prediction 43 74 - -
Ssu4g3144 153 MobiDBLite consensus disorder prediction 30 108 - -
Ssu4g3144 153 MobiDBLite consensus disorder prediction 90 108 - -
Ssu4g3144 153 PANTHER PROLINE-RICH FAMILY PROTEIN 1 153 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3144 - - gmx:102668324 135.961