Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3142 ATGGACTCTGGGCCTTATTCTCAGGAAGAAAAGGATTATAgGAATGTTCATGGAATAAGGGATGATGTGGATGAGAGAGCTTTCTTCCCAGAAGCATCAGGATCAGCTAGGAGCTATACTGATTCATATCAACAACTATCAATGAGCTCCTACAAGTCCTATACAAACTCCAACTTTCAGAACATCAATGACAACAACCCAAGACAGCAAGAGCAACAACACTGCTTTGTTTTGGGGACTGACTTCAAAACAACAAGACCAAGCAAAGAGAAAGAAGCTGAGACAACAAGCCAGAGACCCCTTCACCGCTTCTTTGGGGAGTGGCCACCAAAGAACACAGATTCCTGGCTAGATCTTGCTTCCAACTCCAGAATCCCAACCGATGAATGa 390 0.4385 MDSGPYSQEEKDYRNVHGIRDDVDERAFFPEASGSARSYTDSYQQLSMSSYKSYTNSNFQNINDNNPRQQEQQHCFVLGTDFKTTRPSKEKEAETTSQRPLHRFFGEWPPKNTDSWLDLASNSRIPTDE 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3142 129 MobiDBLite consensus disorder prediction 115 129 - -
Ssu4g3142 129 MobiDBLite consensus disorder prediction 81 129 - -
Ssu4g3142 129 PANTHER - 3 128 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ssu4g3142 129 PANTHER GROWTH-REGULATING FACTOR-LIKE PROTEIN 3 128 - -
Ssu4g3142 129 MobiDBLite consensus disorder prediction 84 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3142 Ssu-Chr4 79633247 79633929 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3142 - - vun:114166369 241.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3142 4 79633247 79633929 Ssu4g3142 4 79633247 79633929 ECH