Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3135 ATGGGTCAAACTGAAAGCGCAGAAGCTGTGGCGGAGACCCAGACCACAACCAACGACTCCTCCAATCCCACTTCCCTGGAATCCGTGCTCGCAGAAGCTGCAGAGTATGGGAACCAACACACTGAGTCTGTTGAGGCAATGGCTCAGAAAGCCCTTGAATGCCCTTGCATTGCTGACTTGCGAACTGGTCCCTGTGGCTCTCAGTTCTCAGAAGCATTCCTGTGTTTTCTCAAGAGTACCTCTGAAGAAAAGGGCTCGGACTGCGTACATCCGTTTGTTGCTCTGCAGAGCTGCATCAAGGCCAATCCAGATGCATTCTCTAAGGACATTCTAGGCGAAGATGAAAGCAAGGAGTCAGAGCCTATCCAAGACTACAAAATACTTCCTCCCAAATGGTCTAAGGAATCTCAAAGTCCAAAATCCAGGCTTTAA 432 0.4954 MGQTESAEAVAETQTTTNDSSNPTSLESVLAEAAEYGNQHTESVEAMAQKALECPCIADLRTGPCGSQFSEAFLCFLKSTSEEKGSDCVHPFVALQSCIKANPDAFSKDILGEDESKESEPIQDYKILPPKWSKESQSPKSRL 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3135 143 Pfam CHCH domain 65 100 IPR010625 -
Ssu4g3135 143 MobiDBLite consensus disorder prediction 110 143 - -
Ssu4g3135 143 PANTHER AU015836 PROTEIN-RELATED 8 138 - -
Ssu4g3135 143 MobiDBLite consensus disorder prediction 1 27 - -
Ssu4g3135 143 MobiDBLite consensus disorder prediction 110 124 - -
Ssu4g3135 143 Gene3D - 32 111 - -
Ssu4g3135 143 PANTHER COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 4 8 138 IPR039289 GO:0015035|GO:0045041
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3135 K17782 - gmx:100305988 264.618