Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3117 ATGGCCTCCTATTTTTCCAGCTCCGTCGAATTCGGCCTCAGTCTCTCGAAGCGAATTTACTACGGCAAAGGCTCGGCTCCGTCGCCGGCGCCGGCGATGTCGAGGTCGCCTGAGGGATACCTCCCGACGGCGCCGATGTGTTACGCGGTGATAACGGATCCGGAGAAAGTGGAGAACCCGGACATTCGGAGTTACCAGCCATACGTGCACGGACAGTGCGAGCCTCCGGCGCTGATACCGCTTGAGCTTCACGGAGTTGCCATGGAAGTGGAGTGCTATTTGGACACGGCGTTTGTAACGGTCACCGGAAAGTGGCGCGTGCATTGCGTGACGGGAAGTAGTACGTGTGATTGCCAGGTTGCCATACCAATGGGTGAACAGGGTTCACTTCTAGGTCTAGAGGTTGATGGTTCTGGAAGATCTTATCATAATGAATTGATCTCTctgaaagatgaaaaggataaggataaagTGGCCAAAGGAAAAGACGGATACTTTTTGAAAAGCCAAATATACACCATTAAGATTCCACAGTTTAGGGGAGGTTCCGTCTTCTCAATTAAGATCAAATGGTCccagaaaatattatttcaagaTGGCCAGTTATCTCTCTGTGTCCCTTTCAGCTTTCCCTCATACGTCAACCCTGTTGGAAAAAGAATTTCTAAGAAAGAGAAGATATTTTTGAAAGTAAATTCTGGTGCTACAACGGAAGTGTTATGCAAAACCACCAGTCATCCTCTTAAGGAACTATTGCGCCGAGCTggcaaattaaatttatcatatgaaGCAGAAGTGCCAGCATGGTCAAGTACAGCCTTCAGTTTCTCATACTCTGTTAGTTCAAATGACATATTTGGAGGTGTTCTCTTGCAATCTCCATTCCTGCGTGATTTTGACGAAAGAGAGATATTTTGCTTGTATCTTTACCCGGGAAACAGCCAGGGTAGAAAGGTTTTAAAAAAGGATGTGGTGTTTATAGTAGATATAAGCGCAAGCATGAAGGGAAGTCCTCTTGAAAACACAAAGAATGCACTACTGACATCACTCTCTCAACTAAATGCACAAGATACATTTAACATTATAGCTTTCAATGGGGCGGTCTCCTTATTTTCGTCATCAATGGAAACAGCTACAGAGGAAGCAATTTTAAATGCTACTAAGTGGGTTGACACTAATTTTATTGCTAATGGTGACACTAATATCATGCTTCCCTTAACTCAGGCAATGAAGCTACTTGAGAAATCAACTGATTCAGTCCCTCTTATTTTTCTCGTTACTGATGGGGCTGTTGAGGATGAGAGAGAGATATGCAATTTTGTGAAAAGCTATGTCTCAAGTGGGCAATCGGTTCGAACACCGCGCATATGTACCTTTGGCATAGGTTTATATTGTAACCACTACTTCCTGCAAATGCTAGCGCAAATTGGGCTGGGCCACTATGATTCTGCTCATGATTTAGATTCAATTGACTTTAGAATGCAAAGGTTATTCAGTACAGCTTCATCAGTTATAGTTGCTGATATAACAATCGATAGTTTAGAAGGTCTTGATTCACATGAGTTATTCCCAACTCAGATCCAAGACCTATCACTTGGAAGTCCGTTGATCCTATCAGGCAGATACAGTGGAACTTTTCCTGAATTAGTTAAAGTCACTGGTACTTTGGCAGATATGACTAACTTCGTAGTAGACCTTAaagtgaaaagagaaaaggatatGCAGCTCAGTAATGTTTTTTCAAAGAGACACATAGACCTGGTCACTGCTCAAGCCTGGCTATTAAAAAGTGAAGAGCTGGAGGAGAAGGTTTCTAAAATGAGTATTCAAAATAAAGTCCCGTCAGAGTATACCTGCATGAGCATGGTTCTTGTACAGAGTGATGAAGGGAAGAAGGCACCTGAACCATTCTGTTGCAAAAGGCATACAACAAACATAGCCCCCAGAAGTTGGAGCTCAACAACCAGAAGTTATTCCTTGGAGGGTTGA 1989 0.4183 MASYFSSSVEFGLSLSKRIYYGKGSAPSPAPAMSRSPEGYLPTAPMCYAVITDPEKVENPDIRSYQPYVHGQCEPPALIPLELHGVAMEVECYLDTAFVTVTGKWRVHCVTGSSTCDCQVAIPMGEQGSLLGLEVDGSGRSYHNELISLKDEKDKDKVAKGKDGYFLKSQIYTIKIPQFRGGSVFSIKIKWSQKILFQDGQLSLCVPFSFPSYVNPVGKRISKKEKIFLKVNSGATTEVLCKTTSHPLKELLRRAGKLNLSYEAEVPAWSSTAFSFSYSVSSNDIFGGVLLQSPFLRDFDEREIFCLYLYPGNSQGRKVLKKDVVFIVDISASMKGSPLENTKNALLTSLSQLNAQDTFNIIAFNGAVSLFSSSMETATEEAILNATKWVDTNFIANGDTNIMLPLTQAMKLLEKSTDSVPLIFLVTDGAVEDEREICNFVKSYVSSGQSVRTPRICTFGIGLYCNHYFLQMLAQIGLGHYDSAHDLDSIDFRMQRLFSTASSVIVADITIDSLEGLDSHELFPTQIQDLSLGSPLILSGRYSGTFPELVKVTGTLADMTNFVVDLKVKREKDMQLSNVFSKRHIDLVTAQAWLLKSEELEEKVSKMSIQNKVPSEYTCMSMVLVQSDEGKKAPEPFCCKRHTTNIAPRSWSSTTRSYSLEG 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3117 662 PANTHER INTER ALPHA-TRYPSIN INHIBITOR, HEAVY CHAIN-LIKE PROTEIN 1 649 - -
Ssu4g3117 662 Pfam von Willebrand factor type A domain 322 481 IPR002035 -
Ssu4g3117 662 SUPERFAMILY vWA-like 322 491 IPR036465 -
Ssu4g3117 662 SMART VWA_4 321 494 IPR002035 -
Ssu4g3117 662 PANTHER INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN-LIKE PROTEIN 1 649 - -
Ssu4g3117 662 ProSiteProfiles VWFA domain profile. 323 497 IPR002035 -
Ssu4g3117 662 CDD vWA_interalpha_trypsin_inhibitor 320 496 - -
Ssu4g3117 662 Gene3D von Willebrand factor, type A domain 321 501 IPR036465 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3117 Ssu-Chr4 79095087 79105372 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3117 - - gmx:100807956 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3117 4 79095087 79105372 Ssu4g3117 4 79095087 79105372 ECH