Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3115 ATGATGTTTCTAGCAATAGCACCAATAAGATATCATGCAAAACAAGAGCCTCGAGAAGAATTCAGCGATTGGCCTCATGGTTTACTAGCAATTGGAACATTTGGAAATAACAGTGAAATCAAAGAAAACATAGATGACCAAAATACACAAGAGGATCCATCCTCATCAGAGGAAATAGCAGACTTCACTACTGAAGAAATTGGGAATCTACAGAAGGAGTTAACTAAACTCCTGAGACGAAAACCCAATGTGGAAAAGGAAATTTCTGAGCTTCCTCTGGACAGATTTCTTAACTGCCCTTCAAGCTTGGAGGTTGATAGGAGAATCAGTAATGCGCTATGCAGTGAatcagaagaaaaagaagaagatattgAGAAGACACTGAGTGTCAtacttgataaatgcaaaggcATTTGTGCTGATAACAGAAAGAAAGCAATTGGGAAGaaatctatttctttcctactGAAGAAGATATTCGTTTGTAGAAGTGGATTTGCTTCAGCACCTACCCTTAGAGATACCCTTCAAGAGTCAAGAATGGAGAAGCTTTTGAGGACAATGCTTCACAAGAAAATTCACACCCAAAATTCTTCTCGTGCATCGTTGATGAAGAAGTGCATAGAGGACAAGAAGGTGACAAGGAAGAGGAATGAGGATGAATCTGATGAGAGAACTGGTGATGGCTGTAAATGGGTCAAGACTGATTCTGAATGTAAGTTGCACTTTGACATATGCCACACCTTAATGAACACCACGGTAGAAATAAAAATCCCGGACTTAAGTGGCTATGATTAA 798 0.3672 MMFLAIAPIRYHAKQEPREEFSDWPHGLLAIGTFGNNSEIKENIDDQNTQEDPSSSEEIADFTTEEIGNLQKELTKLLRRKPNVEKEISELPLDRFLNCPSSLEVDRRISNALCSESEEKEEDIEKTLSVILDKCKGICADNRKKAIGKKSISFLLKKIFVCRSGFASAPTLRDTLQESRMEKLLRTMLHKKIHTQNSSRASLMKKCIEDKKVTRKRNEDESDERTGDGCKWVKTDSECKLHFDICHTLMNTTVEIKIPDLSGYD 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3115 265 Coils Coil 60 87 - -
Ssu4g3115 265 PANTHER OS03G0406300 PROTEIN 11 239 IPR044683 GO:0009630|GO:0040008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3115 Ssu-Chr4 79068534 79070138 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3115 - - gsj:114417729 444.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3115 4 79068534 79070138 Ssu4g3115 4 79068534 79070138 ECH