Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3113 atgTGTGGGGTCTCGCTTCTGGCGTTTCTGTTGCTGCTATCCCTCTGCGCCGAAGCTTCGGTTCACGATTACAGAGGGGAGAAATTCGCCGCCAAAGGCAACGCCTTCGTCGTTCATGGAGGCAGCGAAGGAATTTACGCTTCTGCCCCCAATCTCACCGACACTTTCCCACCCGCAAATCCTGACTCTTACATACGGTTTGAAAGGATTACATTTCGTAGAAACAAGGAGTTTTCTAACTTTAGCTCATGGCCGATTCAAGCGGTTGTTTTTGAAGTTGAAGATAGGGAGACAATTGGTGGTTCAGCCTATGGGGGTCAAAGGGCTGTCTGCTGCACCGGTGATCTAGCAAAACTTGGTGTATGCAATGAAGGGCAGGTAATTCACCGCCCTTCTGCAGAGAATCCTGATTGGCCTCGAGTTTTTGGTGTCTCTTTTGAAATGGATGATGAAGAGGCAGTGCTGCCGTTGAAATCTATGCAAATCACAAAAACTGGGATGTATAACTTGTATTTCATCCACTGTGATCCAAGGCTTAAAGAATTGGTTGTAGAAGGGAAAACTGTATGGAAAAATCCATCTGGTTATCTGCCTGGTAGAATGGCACCTATGAAAATTTTCTACCAATTCATGTCTTTTGCGTATGTGTTGCTTGGGATCTTTTGGTTCTCTCAATATGCTAGATTTTGGAGGGAAGTATTTCCCCTGCAGAACTGCATTACCCTAGTGATAACCCTAGGTATGTTTGAGATGGCATTGTGGTACTTTGACTATGCTGAATTCAGTGAGACTGGAATCAGGCCAACTGGGACAACCATATGGGCAGTCACCTTTGGGACTGTTAAGCGGACAGTGGCACGTCTGGTCATTTTAATGGTTTCAATGGGCTATGGTGTTGTGAGACCTACCCTTGGTGGACTTACGTCAAAGGTGGTTATGCTTGGAGGAACCTTCTTTCTTGCATCTGAAGTTCTTGAATTGGTAGAAAATGTTGGTGCAGTAAGTGACCTTTCTGGAAAGGCAAAACTGTTTTTGGTTCTTCCTGCTGCAGTATTGGATGTGTTCTTCATTCTTTGGATTTTCACTTCACTCTCTGCAACTTTAACTAAGCTTCAGGCCAGAAGGATGATGATAAAATTGGATATTTACAGGAAGTTCACTAATGCTTTGGCGGCAGCTGTGATCGTATCTGTGGGCTGGATATGTTATGAGctttatttcaaatcaaatgatgTATACAATGAGCAGTGGCAGAATGCGTGGATCATCCCAGCCTTCTGGCAAGTTTTGTCTTACTCTCTCCTGTGTGTTATCTGCATTCTTTGGGCACCATCTCAAAATGCAACACGATATACTTACCGTGATGATGGGAGCGATGAGTTTGATAGGGATGAGACTACTTTAACGCTCATAAAGCCATCACCTATTTCTTCAAAAGATGTTCGAAGTGTGCCAGATGCTAGACCAGTGCAAAGCAGTAACGGAAATTCAAATGATGATTTAGAAGAAGACAAGAGAGAATAA 1524 0.4344 MCGVSLLAFLLLLSLCAEASVHDYRGEKFAAKGNAFVVHGGSEGIYASAPNLTDTFPPANPDSYIRFERITFRRNKEFSNFSSWPIQAVVFEVEDRETIGGSAYGGQRAVCCTGDLAKLGVCNEGQVIHRPSAENPDWPRVFGVSFEMDDEEAVLPLKSMQITKTGMYNLYFIHCDPRLKELVVEGKTVWKNPSGYLPGRMAPMKIFYQFMSFAYVLLGIFWFSQYARFWREVFPLQNCITLVITLGMFEMALWYFDYAEFSETGIRPTGTTIWAVTFGTVKRTVARLVILMVSMGYGVVRPTLGGLTSKVVMLGGTFFLASEVLELVENVGAVSDLSGKAKLFLVLPAAVLDVFFILWIFTSLSATLTKLQARRMMIKLDIYRKFTNALAAAVIVSVGWICYELYFKSNDVYNEQWQNAWIIPAFWQVLSYSLLCVICILWAPSQNATRYTYRDDGSDEFDRDETTLTLIKPSPISSKDVRSVPDARPVQSSNGNSNDDLEEDKRE 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3113 507 MobiDBLite consensus disorder prediction 472 507 - -
Ssu4g3113 507 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 8 507 IPR009637 GO:0016021
Ssu4g3113 507 Pfam Lung seven transmembrane receptor 162 448 IPR009637 GO:0016021
Ssu4g3113 507 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR FAMILY PROTEIN 8 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3113 Ssu-Chr4 79056421 79059775 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3113 - - gmx:100806912 980.319
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3113 4 79056421 79059775 Ssu4g3113 4 79056421 79059775 ECH