Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3107 ATGGAGGACGAAATGGCGATGGACACTTCTCCCAATTCCGCTAGTTACTTCGACCCGCACAACCTCACTTCCCGACAGCAGTTCCGCAGATACGGGAAGAGGCACTCAACTTCAGGTGCTTCAATCCAACAAGACAACTCGGCTTCCAAGTTAAGTGAAACTGGGCTGTTATATGATGGTCAAAACATCCATAGTCCTACTAATGCAGCACTTgttcttgaaaatattaaacaagaGGTTGAGAGTCTTGATGCTGATTACTTGGAAGAGAAGACACCACATTCCTCTAGAAGGAGGTTGTCTGCCGATATTCATGGAGTCCCTGGTGTGGATGCTGGTTTTGACTCTGTACGCTACTCATTAAAGGCTTGTAAGACAGAGGGTGACTCATTGGGAGATGGTGCAGAAACAATCTTTACTTTATTTGCATCTCTGCTTGATTCTTCTTTGCAAGGACTGATACCTATTGCTGATCTGATACTAAGATTCGAAAATGCATGTCGAAATGTTTCAGAGTCTATAAGGTATGGTTTGAATATAAGGCATCGAGTTGTTGAGGACAAATTGATGAGGCAGAGGGCTCAGCTCTTGCTTGATGAGGCGGCAACGTGGTCTCTCTTGTGGTTCCTTTATGGGAAAGGAAATATATCTCTAACCATATATTTTCGGttttttaaggatcaattaTGTCTCTCctaa 699 0.4163 MEDEMAMDTSPNSASYFDPHNLTSRQQFRRYGKRHSTSGASIQQDNSASKLSETGLLYDGQNIHSPTNAALVLENIKQEVESLDADYLEEKTPHSSRRRLSADIHGVPGVDAGFDSVRYSLKACKTEGDSLGDGAETIFTLFASLLDSSLQGLIPIADLILRFENACRNVSESIRYGLNIRHRVVEDKLMRQRAQLLLDEAATWSLLWFLYGKGNISLTIYFRFFKDQLCLS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3107 232 MobiDBLite consensus disorder prediction 1 22 - -
Ssu4g3107 232 MobiDBLite consensus disorder prediction 8 22 - -
Ssu4g3107 232 PANTHER NUP107-RELATED 4 214 IPR007252 GO:0005643|GO:0017056
Ssu4g3107 232 PANTHER NUCLEAR PORE COMPLEX PROTEIN 4 214 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3107 K14301 - gmx:100786552 385.571