Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3089 ATGGTGAAATCGAATTCCAATGAGTCGAAGAAACCAGAGGACGTCGACCTTCTCAAATCCGACGTTGCCTCCTTCGCTTCCTCGCTCGGGTTGTCCACTTCACAATCCCATTCAGGTTTCAACGATGTTGATTTTCGCAAAACCAAGCCAAACAGGCCCCCAAAGAAGCAGCAACAAACACCTGAAAAAGTCACACCCCAAAACTCCCAGAAGCCAAAGAACAAAACTTTTACCAAACACAACGGACCCCGCGAGAAGCGCAACGCCAAACCCGAACCAAAACCCCCTGTTCTGTCACTGGATAATGGTTCCAACAAGGAAAAGGGGTTCAACAGGTTTAGGAACCTTCCAAAGCTTCCTTTGATGAAGGCAAGTGTCTTGGGAGTGTGGTTTCAGGACATGGCTGAGCTGGAAGGGAAGGTGGTGGGGGAAGGGAAGAGGGTGGAGATAAGGGATGTGGAAGAGTGGAAAGGGTTTGTGGAGAAGAAGAGGGAGTTGGGGGAGAGGTTGATGGCACAGTATGTTCAGGATTATGAGTCATCAAGGGGGCAAAGCAGTGATATTAAGATGTTGGTTTCTACGCAGAGGTCAGGTACTGCTGCTGATAAAGTGTCTGCTTTTTCTGTCTTGCTGGGGGATAATCCAATTGCAAACTTGCGTTCTCTTGATGCTCTTTTGGGAATGGTGACATCCAAGGTTGGAAAGCGGCATGCATTGACAGGTTTTGAAGCACTGCAGGAATTATTTATTGCAAGcTTATTACCAGATCGTAAATTGAAGACCTTGATACAGCGACCCCTAAATCATGTTCCTGAAACTAAAGATGGTTACTCCCTTCTCCTTTTCTGGTATTGGGAGGAATGTTTGAAGCAGAGATATGAACGGTTTGTTGTTGCACTTGAAGAAGCATCACGAGACATGCTATCTGCTCTAAAAAGCAAGGCATTAAAGGCCATATATGTGCTACTGAGTCGGAAGTCAGAGCAAGAACGCAGACTACTTTCTGCACTTGTTAATAAACTTGGGGATCCAGATAATAAGGCAGCTTCTAATGCTGACTTTCACTTGTCCAACCTTTTGTCTGACCACCCAAACATGAAGGCTGTGGTTATTGACGAGGTGGATTCTTTTCTCTTTCGGCCTCATTTAGGACCACGTTCACAGTACCATGCTGTTAacttcttgagccaaatccgTCTCACAAATAAAGGAGATGGACCAAAAGTGGCAAAACGTCTTATAGATGTATATTTTGTGTTGTTTAAGGTTTTAATTACTGCTGCAAGCAGCAATCAGAAGTCTGATAAAAGCTGCAAGGCAaatccaaaagaagaaaaatcaaaagagttATCAGAATCACATGTGGAATTGGACTCTCGGCTTCTATCAGCTCTCCTAACTGGAGTGAATAGAGCACTTCCTTTTGTCTCAAGTAATGAAGCTGATGACATTGTTGATGTTCAAACACCAGTACTTTTCCAATTGGTTCATTCACAGAATTTTAACGTAGGAGTTCAAGCACTGATGCTTCTCGATaaaatttcatccaaaaatCAGATAGCCAGTGATCGATTTTACCGTGCTTTGTACTCCAAACTTTTGCTTCCGGCTGCCATGAATACATCCAAGGCAAGCAAACTCTTTACGTTTGCCGCAGAAATGTTTATTGCACTTCTTCTCAGAGCAATGAAAAGGGATGTTAATTTAAAGCGAGTGGCTGCATATTCCAAACGTCTATTGCAGattgCACTTCAGCAGCCACCACAATATGCCTGTGCAtgccttttccttctttctgaACTCCTTAAAGCCAGACCACCTTTATGGAACATGGTGTTGCAGAATGAGTCTGTTGATGAGGAACTCGAACACTTTGAAGATGTTATAGAAACTGATAATGAACCTAACACTCTATCAAATAAACAAAACGATAATGGAGTTGTTCAAAATGGTGAGGATGCCACTTCTGACACCAGTTCATCGGAAAGTGAAGATGATCTTCCAGCATCTTCTGAAGATGACGATTCAGTTGATGATGCTTCAGAGGATGTGGGTTTTTTGCTTGCAAAGAATGAAACGGAtcttaagaaatcaaaaaaaccaaaatctgTATCCAATAATGAAGGTCCGCAGTCACAATTATCTGCCAATAAGTCTTGCCTGCCTGGAGGCTATGATCCACGACACAGAGAGCCTTCTTACTGCAATGCAGACCGTGTAAGCTGGTGGGAGTTAATGGTGCTTGCTTCACATGCACACCCTTCAGTTGCTACTATGGCCAGAACTCTTCTTTCTGGGGCCAACATTGTCTATAACGGCAATCCCTTAAACGACCTCTCTCTGACGGCTTTCCTGGACAAATTCATGGAGAAGAAACCAAAACAAAGCACATGGCATGGTGCTTCTCAGATTGAACCTGCCAAGCAGATGGATCTTAATAACCAATTGATTGGACCAGAAATTCTTTCGCTAGCCGAGGCAGATGTACCTCCAGAGGATCTTGTCTTCCACAAGTTCTACACAAACAAGATGAGTTCTACTAAactgaagaaaaagaaaaagaagtcaGCGGATGAGGAAGCAGCTGAGGAGTTGTTTGATATTGATGATGGTGAGGTTGATGGTGGGGATGAGAGTGATAATGAAGAGATTGAGAATCTGTTGGATTCTGCTGATCCATCTTTGGGGCCAGACAATGACTATGATTATGATGATTTGGATAAAGTAGTCGATGAGGAAGATGAGGAGTTGATTGGTGATGTCAGTGATGCAGAGATGGATATACCCTCTGATATGGGAGAGGAAGAGGCTGATGCTccaattgatgatgatgttggaagtgatgatgatgataacaaTGATCTTGAGGTTGGAGATATTGATGATGGCTCTGATGGTGATGGGGAGGAAGTTGGCAGAAGAAAACGAAAACATAAAAGTGGTGGTAAGAGTGGTGTGTCTCCATTTGCAAGTTATGAAGAGTTTGAGCATCTAATGGAAGATGATGACCATACTGAGAAAAATCCTTCACACAAGAAAAACAAatctaagaaaaggaaaaaggtaaTCAGATGA 3075 0.4078 MVKSNSNESKKPEDVDLLKSDVASFASSLGLSTSQSHSGFNDVDFRKTKPNRPPKKQQQTPEKVTPQNSQKPKNKTFTKHNGPREKRNAKPEPKPPVLSLDNGSNKEKGFNRFRNLPKLPLMKASVLGVWFQDMAELEGKVVGEGKRVEIRDVEEWKGFVEKKRELGERLMAQYVQDYESSRGQSSDIKMLVSTQRSGTAADKVSAFSVLLGDNPIANLRSLDALLGMVTSKVGKRHALTGFEALQELFIASLLPDRKLKTLIQRPLNHVPETKDGYSLLLFWYWEECLKQRYERFVVALEEASRDMLSALKSKALKAIYVLLSRKSEQERRLLSALVNKLGDPDNKAASNADFHLSNLLSDHPNMKAVVIDEVDSFLFRPHLGPRSQYHAVNFLSQIRLTNKGDGPKVAKRLIDVYFVLFKVLITAASSNQKSDKSCKANPKEEKSKELSESHVELDSRLLSALLTGVNRALPFVSSNEADDIVDVQTPVLFQLVHSQNFNVGVQALMLLDKISSKNQIASDRFYRALYSKLLLPAAMNTSKASKLFTFAAEMFIALLLRAMKRDVNLKRVAAYSKRLLQIALQQPPQYACACLFLLSELLKARPPLWNMVLQNESVDEELEHFEDVIETDNEPNTLSNKQNDNGVVQNGEDATSDTSSSESEDDLPASSEDDDSVDDASEDVGFLLAKNETDLKKSKKPKSVSNNEGPQSQLSANKSCLPGGYDPRHREPSYCNADRVSWWELMVLASHAHPSVATMARTLLSGANIVYNGNPLNDLSLTAFLDKFMEKKPKQSTWHGASQIEPAKQMDLNNQLIGPEILSLAEADVPPEDLVFHKFYTNKMSSTKLKKKKKKSADEEAAEELFDIDDGEVDGGDESDNEEIENLLDSADPSLGPDNDYDYDDLDKVVDEEDEELIGDVSDAEMDIPSDMGEEEADAPIDDDVGSDDDDNNDLEVGDIDDGSDGDGEEVGRRKRKHKSGGKSGVSPFASYEEFEHLMEDDDHTEKNPSHKKNKSKKRKKVIR 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 630 724 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 54 76 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 994 1010 - -
Ssu4g3089 1024 SUPERFAMILY ARM repeat 244 603 IPR016024 -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 862 887 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 689 703 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 28 106 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 666 681 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 632 665 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 861 1024 - -
Ssu4g3089 1024 PANTHER CCAAT-BINDING FACTOR-RELATED 13 1012 IPR040155 -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 433 452 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 898 966 - -
Ssu4g3089 1024 Pfam CBF/Mak21 family 505 760 IPR005612 -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 437 452 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 704 719 - -
Ssu4g3089 1024 MobiDBLite consensus disorder prediction 78 92 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3089 K14832 - gmx:100802669 1600.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3089 4 78713219 78720640 Ssu4g3089 4 78713219 78720640 ECH