Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3069 ATGGGAAAAGTTCATCCCCAAGCACTACATTCCTCTACTACTTGCAATTTCACTTGCAAGCAAGAGACTTTTACCCTATGGATGAAATCTCTGGTACTGAACGGAAAGGGATGTACCGTCTTTGATTCAAATGGCCAAATTGCATACCGAGTTGATAACTACAACTGCAGGCATAGATATGAAGTTCATCTCATGGATCAAAATGGTGATATTTTGTTTACTATGCTGAAAAAGcaATATAAGTTGTCCAGGTTTTGGGAGGGTTATAGATTCCCAGCAACAAGGAATGACCACAAAGCTGGACCATGCTTTCGAGTTTCTAAAACTTATAAGATCTCTAAAGGGGGTTCAACCTGTGAAGTTGAACTTGGATTGGACAAAAATCAACCGTACACTCATAAAATAGAAAGCAGCACTTGCAACTCAGCTTGCAAAATATATAACGAATTTGGAGCGGTAGTTGCGGAGCTAAGGAGAAAGAAGTCACGTTGTGGAGTTGATTTAGGAGACGATGTTTTCACAATGGTAGTGGAGCCAAATATAGATCTTTCTCTAATTATGGGGCTTGTTGTAGCATACAATCTTATCAACTGTAAAATGTAA 603 0.3881 MGKVHPQALHSSTTCNFTCKQETFTLWMKSLVLNGKGCTVFDSNGQIAYRVDNYNCRHRYEVHLMDQNGDILFTMLKKQYKLSRFWEGYRFPATRNDHKAGPCFRVSKTYKISKGGSTCEVELGLDKNQPYTHKIESSTCNSACKIYNEFGAVVAELRRKKSRCGVDLGDDVFTMVVEPNIDLSLIMGLVVAYNLINCKM 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3069 200 PANTHER - 2 199 IPR007612 -
Ssu4g3069 200 Gene3D - 16 199 IPR038595 -
Ssu4g3069 200 PANTHER PROTEIN LURP-ONE-RELATED 11 2 199 - -
Ssu4g3069 200 Pfam LURP-one-related 19 191 IPR007612 -
Ssu4g3069 200 SUPERFAMILY Tubby C-terminal domain-like 20 197 IPR025659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3069 Ssu-Chr4 78244112 78244917 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3069 - K03239 gmx:100820270 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3069 4 78244112 78244917 Ssu4g3069 4 78244112 78244917 ECH