Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3057 ATGCAGATGGACTCCTCCTCCGACGATGAAGACGACCACCGCCACCTCGTCGAGCAGAACCACCGCAAGCCTCCGTCCCCGCCAGCCGCCTTCGACGTCGAGGATCTCACCTCGCGCTTCCGCCGCGCGAATTTCAGGCTCCAGAAGAAGTACATTATCGCCATCCTCGCTCTCCTCGTCGttctcctcctcttcttctccgTCGCCGATTTCCGCAACCTCTTCTCAACTTCTTCGCTCAAGTTCGATTCCCTCACTGATCGAATGAAGGAATCCGAATTGCGCGCCATTGACCTCTTGCGCCGACAGCAGCTAGGGCTCTTAACCGCGTGGAACCGCACGCTCCGAGCCAACGCTTCGGATCCGAACCAATTGGAGGATCTGAAGTCTTCTCTGTTCAAGCAGATTTCCCTCAACCGCGAGATTCAGCAGGTTCTGCTGAATCCGCATTCCACGGGGAACTTAATTGAGCCTGAATTCGATTTCGGAAACGCGAGTTCCAACGGTGTCGTTTACGATAGGTGTAGAACGGTGGATCAGAACTTGTCGCAGAGGAGAACCGTTGAGTGGAACCCTAGGGATGGTAAATTCTTGCTTGCTGTTTGCGTTTCGGGTCAAATGTCGAACCATTTGATTTGTTTGGAGAAACACATGTTTTTCGCTGCCTTGCTAAATAGGGTTTTGGTGATTCCTAGTTCCAAGGTGGATTACCAGTACGACAGGGTTGTGGACATTGATCACATTAACAAGTGCTTGGGGAAGAAAGTGGTGGTTTCGTTTGAGGAGTTTTCGAACGTAAAGAAGGGTCATATGCACATTGATAAGTTTTTGTGTTATTTCTCGCAGCCTCAGCCTTGTTATCTGGATGATGAACGGTTGAAGAAGTTGGGTTCGTTGGGTTTGACGATGAGTAAACCCAAGGCTGTGTGGGATGAGGACACCCGGAATCCGAAGAAGAAGACGGTTCAGGATGTGTTGGGTAAGTTTAgttatgatgatgatgttatGGCGATTGGGGATGTGTTCTATGCTGAAGTGGAACGAGAATGGGTGATGCAACCGGGTGGGCCAATTGCTCACAAATGCAAGACTCTGATTGAACCTAACCGCCTCATTTTGCTCACTGCTCAGCGGTTTATTCAGACATTCCTCGGAAGGAACTTCATTGCGTTGCATTTTCGAAGACACGGGTTTTTGAAATTCTGTAATGTTAAAAGGCCAAGTTGCTTTTACCCCATTCCTCAAGCTGCAGATTGCATCTTGAGGGTGGTTGAGAGGGCCGATGCACCTGTTGTTTATCTTTCTACGGATGCAGCAGAAAGTGAAACTGGTTTGCTTCAGTCACTAGTTGTGCTGAATGGCAGGCCTGTTCCTCTTGTAATACGCCCAGCTCGTAATTCAGCAGAAAAATGGGATGCTCTGTTATACAGGCATGGTATGGAGGGAGATTCACTGGTGGAAGCTATGCTGGACAAGACTATATGTGCCATGTCTAGCGTGTTCATTGGAGCCCCTGGTTCCACTTTCACCGAAGACATCCTGCGGCTGAGAAAGGACTGGGGATCAGCTTCCATGTGTGATGAGTATCTTTGCCAAGGTGAGGAACCAAATGTTGTAGCGGAAAATGAATGA 1632 0.4816 MQMDSSSDDEDDHRHLVEQNHRKPPSPPAAFDVEDLTSRFRRANFRLQKKYIIAILALLVVLLLFFSVADFRNLFSTSSLKFDSLTDRMKESELRAIDLLRRQQLGLLTAWNRTLRANASDPNQLEDLKSSLFKQISLNREIQQVLLNPHSTGNLIEPEFDFGNASSNGVVYDRCRTVDQNLSQRRTVEWNPRDGKFLLAVCVSGQMSNHLICLEKHMFFAALLNRVLVIPSSKVDYQYDRVVDIDHINKCLGKKVVVSFEEFSNVKKGHMHIDKFLCYFSQPQPCYLDDERLKKLGSLGLTMSKPKAVWDEDTRNPKKKTVQDVLGKFSYDDDVMAIGDVFYAEVEREWVMQPGGPIAHKCKTLIEPNRLILLTAQRFIQTFLGRNFIALHFRRHGFLKFCNVKRPSCFYPIPQAADCILRVVERADAPVVYLSTDAAESETGLLQSLVVLNGRPVPLVIRPARNSAEKWDALLYRHGMEGDSLVEAMLDKTICAMSSVFIGAPGSTFTEDILRLRKDWGSASMCDEYLCQGEEPNVVAENE 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3057 543 PANTHER - 4 543 - -
Ssu4g3057 543 MobiDBLite consensus disorder prediction 1 30 - -
Ssu4g3057 543 CDD O-FucT_like 359 517 - -
Ssu4g3057 543 Gene3D - 363 531 - -
Ssu4g3057 543 MobiDBLite consensus disorder prediction 1 21 - -
Ssu4g3057 543 Pfam GDP-fucose protein O-fucosyltransferase 218 517 IPR019378 -
Ssu4g3057 543 PANTHER GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 2 4 543 IPR045130 GO:0036066|GO:0046922
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3057 Ssu-Chr4 78016937 78019423 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3057 K03691 - gmx:100776069 964.526
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3057 4 78016937 78019423 Ssu4g3057 4 78016937 78019423 ECH