Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3052 ATGAAGCAGCACGAGTTAACTCTGTTACTGTGCCTCTTATGGGCACTAACCCTTCTGTATGGGGAGATGTTCGCTTACTGGGTTCCACCCCTCTTCACCTGTTCCTGGCCCCATCTTCTCCGCACCTCTTCTTCTGCAACGATTCAAACAGACAGAGGGAGTTATCAAGATGATTATGTAAAAGTTGCTGTTATTGCAGATCCACAGcTCATGGATAAAACTTCTCTCAGTCTTCCTGCAAAATCTCTTGCACTGGAACTTGCGGAATTCTACACTGATTTAAACATGCGTAGATCATTCTTTGCATCTGTCCTGCCTTTCAAACCTGATGTCATATTGTTTTTAGGTGATTACTTTGATGGAGGTCCTTATTTATCAGATGAAGAATGGCAGGAGTCTTTCAGTCGCTTCAGACATATCTTTGGTTTGAATGCACAAGGAAAATACACAGACATGCAAGTTTACTACATTCCAGGAAACCATGATATTGGGTATGAAAGTCTTCATTCTCTAAAGCCAGAGGTTATCCAACGCTATGAGGAAACATTTGGGATTGGGAACTACAGATTTACGGTTGGAAAAGTGGATTTTATTGCCGTTGATGCACAAACTCTGGATGGACACCCACAAAATCATCTGACTTCTCAAACTTGGGATTTTGTGAAGAATATCTCTGTTGGTGATGCGGTTCATCCAAGAGTCTTATTGACACATATTCCTTTATATCGACGTGATGATACTTACTGTGGTCCTGATCGTAGTTCCCCAATTATCAATCAGAGGATACATCGTGCTGTAAATGGTGATACTAATGATATATCGtatcaaaattatgtttttgaggAGTCATCAAAGTACTTACTGGATACAATCAAACCTAAGCATATTTTATCTGGTCATGATCACGATCAGTGCACCGTCACTCATCAATCTAAATCTGGGCCTGTAAATGAGCACACCCTAGGTACTATAAGTTGGCAACAAGGAAACTTGTATCCTTCGTTCATGCTATTATCAGTTGTTAACTCAACTCTTCCAAATGCTTCCATTCCAAAAGAGGCATTGTTGACTCTACTATGTTACCTTCCAATGCAAGCACACATTTACATATGGTATATTGTGCTATTTATTCTGACCCTTCTTGCTGCCCTATTTTGGCCAACAAGTGGCACGAGTTTGTGGCACCAATGTTGGGGCATAGTAGGCCATTGTAAACGCCTAATAGCTAGCATCTTTTCTAGAAGCGAAACGAAAGACAAGGATGAGGATGCTAACTATGAATATGAGATGATGTGGGATGCAGAAGGAACAATGCATCTTGTAAAGAAACCCTTGAATGCATCTACTGTAAATTCAAATGACCGGAGCTTAGGGGAAAGGGGTAATGTTGTGATGCGAGCAGCGGCTAGAAAAAATACTGCTCAGGAAGGAGATCTGTCTCTGAATGTGGATATGGCTTCAGGCATTGGTCTTGATCCTGTAGCAAGAATACCTCCCAGAACAGGCAAATCAAAGACAAAGATTATAATCCAGAGATTGATACGCACACTGCAAATGCTCACTGTCATTGCAGCAGTGAATGTTCCTCTTTACATGATGTTGCTATTCAAGGATTGGATTGacaaataa 1629 0.4045 MKQHELTLLLCLLWALTLLYGEMFAYWVPPLFTCSWPHLLRTSSSATIQTDRGSYQDDYVKVAVIADPQLMDKTSLSLPAKSLALELAEFYTDLNMRRSFFASVLPFKPDVILFLGDYFDGGPYLSDEEWQESFSRFRHIFGLNAQGKYTDMQVYYIPGNHDIGYESLHSLKPEVIQRYEETFGIGNYRFTVGKVDFIAVDAQTLDGHPQNHLTSQTWDFVKNISVGDAVHPRVLLTHIPLYRRDDTYCGPDRSSPIINQRIHRAVNGDTNDISYQNYVFEESSKYLLDTIKPKHILSGHDHDQCTVTHQSKSGPVNEHTLGTISWQQGNLYPSFMLLSVVNSTLPNASIPKEALLTLLCYLPMQAHIYIWYIVLFILTLLAALFWPTSGTSLWHQCWGIVGHCKRLIASIFSRSETKDKDEDANYEYEMMWDAEGTMHLVKKPLNASTVNSNDRSLGERGNVVMRAAARKNTAQEGDLSLNVDMASGIGLDPVARIPPRTGKSKTKIIIQRLIRTLQMLTVIAAVNVPLYMMLLFKDWIDK 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3052 542 Gene3D - 96 349 IPR029052 -
Ssu4g3052 542 CDD MPP_Cdc1_like 63 329 - -
Ssu4g3052 542 PANTHER METALLOPHOSPHOESTERASE, ISOFORM E 2 536 - -
Ssu4g3052 542 PANTHER METALLO PHOSPHOESTERASE RELATED 2 536 IPR033308 GO:0006506
Ssu4g3052 542 SUPERFAMILY Metallo-dependent phosphatases 57 343 IPR029052 -
Ssu4g3052 542 Pfam Calcineurin-like phosphoesterase 61 303 IPR004843 GO:0016787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3052 K23362 - gmx:100776604 998.808