Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3048 ATGATTGACCCCTATTGGACTGTGATACCTGTGATGCTTGTTCACTACTTTGCAACTCACCCTTTGGCTCACTATGATTGTTGGAGGTCAAGGATCGTGATTTTGTTGACTTGGGTGTGGAGTGCTAGGCTCACTCATAACTACTTCAGGAGAGAGAGGTGGCAATGGGGTGCCAGGGAAGATTGGCGTTTCACTGAGATGAGTCAGCAATATGGAAAGCAATGGTGGTGGATTTCATTCTTTGCTGTCTATGTCTCCCAACAGaTGTTTTTGATTGGATTGTCTCTTCCCTTGTATGCTGTCCATACTGTCAATCAGCCTTTGAGCTTCTGGGACTTGGTGGCTACTGTTGTCTGTTTATGTGGCATTGTGATAGCATATTTGGCTGATACACAGCTCTATGAGTTTGTGAGTAGAAACAACGAGCTGAGGGGGCTTGGTAAACCTGTAGTTCCTGTCCTTGACAGTGGCTTGTGGTATTACTGCCGGCATCCAAATTACTTTGGTGAGCAGTTGTGGTGGTGGGGACTTGTTGTGTTTGCGTGGAGCCTGGGACTTGGATGGACCTTTATTGGAGCTTTGGTTAATAGTATGTGTTTGGCATATGTGACTAGGCTTGTGGAGGACCGAATgttgaaaaaagaaagtagaGCAGAAGCATTTAGGCTGTATCAGAAGACAACTTCTGTGTGGGTACCTTGGTTCAAGTCCTCTCCTTCAGgagttaaaaataagaatgctTGA 744 0.4382 MIDPYWTVIPVMLVHYFATHPLAHYDCWRSRIVILLTWVWSARLTHNYFRRERWQWGAREDWRFTEMSQQYGKQWWWISFFAVYVSQQMFLIGLSLPLYAVHTVNQPLSFWDLVATVVCLCGIVIAYLADTQLYEFVSRNNELRGLGKPVVPVLDSGLWYYCRHPNYFGEQLWWWGLVVFAWSLGLGWTFIGALVNSMCLAYVTRLVEDRMLKKESRAEAFRLYQKTTSVWVPWFKSSPSGVKNKNA 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3048 247 Pfam Protein of unknown function (DUF1295) 1 228 IPR010721 -
Ssu4g3048 247 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 1 247 IPR010721 -
Ssu4g3048 247 PANTHER PHOSPHOLIPID METHYLTRANSFERASE 1 247 - -
Ssu4g3048 247 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 115 184 IPR001104 GO:0006629|GO:0016627
Ssu4g3048 247 Gene3D - 6 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3048 Ssu-Chr4 77887347 77888739 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3048 - - gmx:100783556 504.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3048 4 77887347 77888739 Ssu4g3048 4 77887347 77888739 ECH