Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3037 ATGAGTGAGAATGGGAATGAGAATGGTGGTGAAGAAGCTCGAGCAAACCGTCCTACACCCCGCTTAAATGAAAGGATTCTTTCATCTTTATCCAGGAGATCAGTTGCTGCACACCCCTGGCATGATCTAGAAATTGGACCTGGAGCGCCTCATATTTTCAATTGTGTTGTGGAGATCACTAAGGGAAGCAAGGTCAAATACGAACTTGACAAAAAGACTGGATTAATTAAGGTCGATCGGATTTTGTACTCATCAGTTGTTTATCCTCATAACTATGGTTTCATCCCTCGAACTCTATGTGAAGACAATGATCCACTTGATGTCTTGGTTCTCATGCAGGAGCCAGTTCTTCCTGGTTGTTTCCTGAGAGCCAGGGCCATTGGACTCATGCCCATGATTGACCAGGGGGAGAAGGATGACAAAATTATTGCAGTATGTGCTGATGATCCAGAATATAAGCACTATACTGACTTCAAAGAACTTCCACCTCATCGCCTCTCTGAGATCCGGCGCTTCTTTGAAGACTACAAGAAGAATGAGAACAAGGAGGTAGCAGTTAATGAGTTTTTACCTGCATCCACTGCTGTTGAAGCCATCCAGTACTCAATGTCAGTATCTATGGAGCACctagtgtatttcttttttaattctagtatctaa 660 0.4182 MSENGNENGGEEARANRPTPRLNERILSSLSRRSVAAHPWHDLEIGPGAPHIFNCVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDFKELPPHRLSEIRRFFEDYKKNENKEVAVNEFLPASTAVEAIQYSMSVSMEHLVYFFFNSSI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3037 219 CDD pyrophosphatase 52 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g3037 219 PANTHER INORGANIC PYROPHOSPHATASE 21 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g3037 219 SUPERFAMILY Inorganic pyrophosphatase 32 205 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g3037 219 MobiDBLite consensus disorder prediction 1 21 - -
Ssu4g3037 219 ProSitePatterns Inorganic pyrophosphatase signature. 102 108 - -
Ssu4g3037 219 Hamap Inorganic pyrophosphatase [ppa]. 51 207 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g3037 219 Pfam Inorganic pyrophosphatase 55 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g3037 219 Gene3D Inorganic pyrophosphatase 34 212 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Ssu4g3037 219 PANTHER BNAC07G03580D PROTEIN 21 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3037 Ssu-Chr4 77664081 77666421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3037 K01507 - qsu:112036652 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3037 4 77664081 77666421 Ssu4g3037 4 77664081 77666421 ECH