Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3031 ATGGCCTCAACCTCTTCTGCTCTCACTATATCCTCTTCTTCCACCCTTGTTGATGGCAAGGCTCCAAGACAGTCACCAGCTGCTTCCCCACAATGTGTGAGcctcccccctccccctttGACCTCTCAGAACCGTGCATGGAAGACCACTGCTTATGGTCGCAAGATTGCTCGTAATGTTATGGCAATGGCCACAGGCGAGGCACCAGCTGAAGTTGCCCCAACTGAGGTGCCAGAGTTTGTCAAGACTCTTCAAGAAGCTTGGGACAAAGTTGATGATAAGTATGCAGTGAGTTCACTGGCCGTGGTTGGGGTGGTTGCATTGTGGGGCTCAGTTGGGTTGATCTCAGCAATTGATAGGCTTCCTTTGATTCCTGGGGTTCTTGAGATTGTAGGCATTGGCTACACTGGGTGGTTTGTATATAAGAACATAGTTTTCAAGCCAGACCGGGAAGCTTTGAtatgcaaaataaaagaaacatataaagaaataaTCGGGAGCAACTGA 507 0.4477 MASTSSALTISSSSTLVDGKAPRQSPAASPQCVSLPPPPLTSQNRAWKTTAYGRKIARNVMAMATGEAPAEVAPTEVPEFVKTLQEAWDKVDDKYAVSSLAVVGVVALWGSVGLISAIDRLPLIPGVLEIVGIGYTGWFVYKNIVFKPDREALICKIKETYKEIIGSN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3031 168 PANTHER PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC 1 167 - -
Ssu4g3031 168 MobiDBLite consensus disorder prediction 1 20 - -
Ssu4g3031 168 MobiDBLite consensus disorder prediction 1 44 - -
Ssu4g3031 168 PANTHER - 1 167 IPR033344 GO:0009579
Ssu4g3031 168 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 82 166 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3031 Ssu-Chr4 77444597 77446241 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3031 - - gmx:100306403 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3031 4 77444597 77446241 Ssu4g3031 4 77444597 77446241 ECH