Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3021 ATGGGAAACTGCGTGTTCAAAGGGTTCTTGCACGAAGGCGTGTCGGAAGACACGATGGTGAAAGTGGTAACCTCAAACGGAGGTATCATGGAACTCTTCTCTCCCATAACCGTGGAGTGCATAACCAACGAGTTCCCCGGCCACGGCATCTTCCGAAGCCGCCGTGACATGTTCTCCGAACCTCTCCCCAAAACCGAGGAGCTCCATGGCGGCGAGGTCTACTACCTCCTCCCTCTcaacccttcttcttcttccaagaGCTTGAGGAGACAGTTATCCGACCCCGCCGCCACCTTAACACCATACCGAATGTCCACGTgtgagaaaaataacaacaacaataacaataacaacaacaatgcgTGGTCGGAACCCGAGGTGGTTCCAAGGTACAATAGTAGCGGGGTGTGGAAGGTGAAGTTGGTGATTAGTCCCGAGAAGCTGTCGGAGATATTGTCGCAGGAATCGCGGACAGAGGCGTTGATAGAGAGCGTGAGGACGGTGGCCAAGTGCGGCAACGGTGTGCCGTCGTCGGTGGCAAACTCCGATCAATGGAGTGTGGCGAGCAGTTGGAAAGGTTCTATGTCGGAGAAGATGGGTGTAGAATAG 609 0.4943 MGNCVFKGFLHEGVSEDTMVKVVTSNGGIMELFSPITVECITNEFPGHGIFRSRRDMFSEPLPKTEELHGGEVYYLLPLNPSSSSKSLRRQLSDPAATLTPYRMSTCEKNNNNNNNNNNNAWSEPEVVPRYNSSGVWKVKLVISPEKLSEILSQESRTEALIESVRTVAKCGNGVPSSVANSDQWSVASSWKGSMSEKMGVE 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3021 202 MobiDBLite consensus disorder prediction 105 124 - -
Ssu4g3021 202 Pfam PADRE domain 1 173 IPR025322 -
Ssu4g3021 202 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 190 - -
Ssu4g3021 202 PANTHER DUF4228 DOMAIN PROTEIN 1 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3021 Ssu-Chr4 77259907 77260515 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3021 - - gmx:102665356 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3021 4 77259907 77260515 Ssu4g3021 4 77259907 77260515 ECH