Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3003 ATGGGATCACCTTATGGAGTGGAAAATGGAGACTATGACTACAAGGAAAACCAAGGGATAACAACAAAGCCATATTACTTGGTGATTTTCATCTTATCTTTGTTGGTTAGCATAGTAGGAGGCTCTTTGCTTGGGTGGTGGCTACACAAATATCATCCAAAAAATAGGCAACTTTGGATGGTGCCCTTTGGCCTCATTCTTTTGCTTACCCCAGTCATTGTTTGGTTCTCCCTCATCATTTCTGACCTGTGTATTTCCAAAAACGAGGAAGAGGATGTTTTTAAGATGAATCAACGCATTCATCCACTGGATGAGTCTCTTTGTGACCCAAAGAGATGA 339 0.41 MGSPYGVENGDYDYKENQGITTKPYYLVIFILSLLVSIVGGSLLGWWLHKYHPKNRQLWMVPFGLILLLTPVIVWFSLIISDLCISKNEEEDVFKMNQRIHPLDESLCDPKR 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3003 112 Pfam Putative AtpZ or ATP-synthase-associated 29 81 IPR032238 -
Ssu4g3003 112 PANTHER OS08G0113900 PROTEIN 13 103 - -
Ssu4g3003 112 CDD TM_PBP2 27 81 IPR000515 GO:0016020|GO:0055085
Ssu4g3003 112 PANTHER OS08G0113900 PROTEIN 13 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3003 Ssu-Chr4 76751616 76751954 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3003 - K07027 gmx:100527112 169.859