Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2980 ATGGCGGAGTTGATGGGATCACGGGCATACTGCTGCTTTAATTGCCAAAACCTTGTTGCTTTCCATGATGACATTGTTTCCAAAGATTTCCAGGCAAGCAAGGGCAGAGcttttttattctctcatgCGATGAACATTATTTTGGGTCCTAAAGAGGATAGGCAGCTTATCACTGGTCTTCACACAGTGGCTGATGTGTATTGCTCTGATTGTGGAGAAGAACTTGGTTGGAAATATCTTAAAGCTTACGAGGAATCACAAAAGTACAAAGAAGGGAAGTGTGTACTAGAGAAGTTCAAGATAGTCAAGGGCAATGGATAG 321 0.405 MAELMGSRAYCCFNCQNLVAFHDDIVSKDFQASKGRAFLFSHAMNIILGPKEDRQLITGLHTVADVYCSDCGEELGWKYLKAYEESQKYKEGKCVLEKFKIVKGNG 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2980 106 PANTHER PROTEIN YIPPEE-LIKE 4 105 - -
Ssu4g2980 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Ssu4g2980 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 4 105 IPR039058 -
Ssu4g2980 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 101 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2980 Ssu-Chr4 76127308 76128027 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2980 - - gmx:100788878 216.083