Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2950 ATGGGAAAGCGCCTCCAAAACGTTACTTCCTCCGGCGGCGAGATGCAGCCGGAAAAGCGGACCCGGCGGAGCAAAACCATTCGCTCTTGCAACTCTCCTTGTCCTCCGTTTCTCTCTGCTCATTCCACTTTCTCCTGGTTCGAAGAAGACATTTGGACAGAGATTACTAAGTTTCTGGACGGAAAATCTCTGGTGATGCTGGCAGCCACGAGCCGATGGTTCCGCCGGGCCATCATGGATGACGGTATATGGAAGTTCGTGTGCCTGCGTGATCTTCAGGTCCCACCCCCGGAACGCGTGGCATTCAGGTGGTGCAAGCTGTACACCTCAGCCTTTGATGGAAGCCACTCCTACATGTTCCGTCAACAAGAGAAACATATAGATTGGATGCGTATTGGCgccttttcttttgattcttctGTAGCCGTCGTGACAGAGAGACTGACTTTTCCGGGAAAGATAAGGAAAGGAGAAACCATGGAAAATATGCTGCGGTCTCAAGGTTGTTGCGTGCTAGACAATGTTAAATCTGGAATCTGGATAGCTGACCTGCAGCTTGTAAGATGCCCGGTTTGTGACCTCAATACGTGCGACGGAACGATGCAGACGTTAGATGCAAGGCACATAGAACTATTCCTCTGTGAAGGCTACCGAAATGGGAGCTGGGATTACCAGCTTGTAGGATCTCATGATATCAAAAAACGGGCAGATGGGGCTGCTGGAGCCATTTTTGACTTCAAACACCTGGAGGATTCTTCAACGTCGGCGGTATTTGATTACAAGTCATGGATTGGGAGACCAAATGACTGGCAACCCAAGGCCATGATTGCTTTCCATGCCGTAGCTGTGAACACTAACTTACAAGAAAATGAAGGTCTTCATGTGAAATACCATGCTATGAGGGCAGGAACTGATGGAGAAGTTGTTTCTATTAGAATCTCTCAACAGCTACTGTGA 957 0.4807 MGKRLQNVTSSGGEMQPEKRTRRSKTIRSCNSPCPPFLSAHSTFSWFEEDIWTEITKFLDGKSLVMLAATSRWFRRAIMDDGIWKFVCLRDLQVPPPERVAFRWCKLYTSAFDGSHSYMFRQQEKHIDWMRIGAFSFDSSVAVVTERLTFPGKIRKGETMENMLRSQGCCVLDNVKSGIWIADLQLVRCPVCDLNTCDGTMQTLDARHIELFLCEGYRNGSWDYQLVGSHDIKKRADGAAGAIFDFKHLEDSSTSAVFDYKSWIGRPNDWQPKAMIAFHAVAVNTNLQENEGLHVKYHAMRAGTDGEVVSIRISQQLL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2950 318 Gene3D - 37 130 - -
Ssu4g2950 318 PANTHER F-BOX PROTEIN RMF 16 318 - -
Ssu4g2950 318 MobiDBLite consensus disorder prediction 1 28 - -
Ssu4g2950 318 SUPERFAMILY F-box domain 42 108 IPR036047 GO:0005515
Ssu4g2950 318 MobiDBLite consensus disorder prediction 1 15 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2950 Ssu-Chr4 75439650 75443671 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2950 - - gmx:100797890 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2950 4 75439650 75443671 Ssu4g2950 4 75439650 75443671 ECH