Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2927 ATGAACGGTGGTGAATCGTACGGTGCAATTGAGACACAATACATAAGGAGGCATCACAGACATGAACCGAGGGAAAATCAGTGTACCTCTGCGCTTGTCAAGCACATAAGAGCTCCTGTTCACCTTGTGTGGTCGCTGGTTAGAAGATTTGATCAACCCCAGAAATATAAACCATTTGTTAGCAGGTGTATCATGTTAGGGGACCTTGGCATTGGAAGCGTTAGAGAAGTGAATGTTAAATCTGGCCTTCCAGCCACCACAAGTACTGAGAGGTTGGAACAACTTGATGATGAGGAACACATTCTTGGCATCAGGATTGTTGGAGGTGACCATAGGCTGAGGAACTATTCTTCCATAATCACCGTCCATCCAGAGGTCATTGACGGGGGACCTGGTACCATGGTGATTGAATCATTTGTGGTGGACGTGCCTGATGGGAACACCAGGGATGAGACTTGTTCCTTTGTGGAGGCTTTGATCAGGTGTAACCTAAGCTCTTTGGCTGCTGTTTCAGAGAGGATGGCCGTGCAGGTTCAAACCGATCCCATCAACCATTAA 558 0.4713 MNGGESYGAIETQYIRRHHRHEPRENQCTSALVKHIRAPVHLVWSLVRRFDQPQKYKPFVSRCIMLGDLGIGSVREVNVKSGLPATTSTERLEQLDDEEHILGIRIVGGDHRLRNYSSIITVHPEVIDGGPGTMVIESFVVDVPDGNTRDETCSFVEALIRCNLSSLAAVSERMAVQVQTDPINH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2927 185 CDD PYR_PYL_RCAR_like 28 172 - -
Ssu4g2927 185 SUPERFAMILY Bet v1-like 28 170 - -
Ssu4g2927 185 PANTHER ABSCISIC ACID RECEPTOR PYL3-LIKE 6 182 - -
Ssu4g2927 185 Gene3D - 3 181 IPR023393 -
Ssu4g2927 185 Pfam Polyketide cyclase / dehydrase and lipid transport 33 172 IPR019587 -
Ssu4g2927 185 PANTHER - 6 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2927 Ssu-Chr4 74628738 74631853 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2927 K14496 - gmx:100500065 359.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2927 4 74628738 74631853 Ssu4g2927 4 74628738 74631853 ECH