Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2910 ATGGATCCTGAAGGCAAAAAGTTTGGAGGAGGACCAAGGGAATTGACAGGTGCTGTGGATCTTATAAGTCATTTCAAGTTACTACCCCACTATGAGTTTTTCTGCAAGAGGCCTCTCCCTGTGTCAATTGCGGACACACACTACCTTCACAATGTTGTAGGAGACAcagaaataagaaaaggagaTGGGATGCAATTGGATCAACTTATTCAGAATACTTCATCCTTCAGAGATACAAATGCTCGTATACAACCTTTTGACCTAGATGTTCTCAAAGAGGCTTTCCAACTAAGGGAAACGGCTCCTATTGATTTGCCTGCTGCAGAGAAAGGGATTCCAACTATTGCAGGAAAATCAAAAAGTGAGAATAAAGACAAGGAGAAGAAGCATAAAAAGCACAAAGACAgggaaaaggataaggacaaggACAAGGACAAGGAGCATAAGAAGCACAAGCATCGTCATAAAGACCGAAGCAAGGACAAGGACAAGGACAAAGACaaggacaaaaagaaagataaaagcgGGCATCGTGATTCCAGTGCTGATCACTCGAAGAAACACCATGAAAAGAAAAGGAAGCATGATGGAGATGATGATGTTAATGATGCGCACAAACACAAAAAGAGTAAGCATAAGAGCTCAAAAATTGATGAGTTGGGAGCAATTAAGGTTGCAGGCTAA 684 0.3787 MDPEGKKFGGGPRELTGAVDLISHFKLLPHYEFFCKRPLPVSIADTHYLHNVVGDTEIRKGDGMQLDQLIQNTSSFRDTNARIQPFDLDVLKEAFQLRETAPIDLPAAEKGIPTIAGKSKSENKDKEKKHKKHKDREKDKDKDKDKEHKKHKHRHKDRSKDKDKDKDKDKKKDKSGHRDSSADHSKKHHEKKRKHDGDDDVNDAHKHKKSKHKSSKIDELGAIKVAG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2910 227 MobiDBLite consensus disorder prediction 132 146 - -
Ssu4g2910 227 MobiDBLite consensus disorder prediction 160 206 - -
Ssu4g2910 227 PANTHER LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN 1 226 IPR019403 GO:0003712|GO:0006357|GO:0016592
Ssu4g2910 227 MobiDBLite consensus disorder prediction 108 227 - -
Ssu4g2910 227 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 19A-LIKE ISOFORM X1 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2910 Ssu-Chr4 74297227 74299411 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2910 - - var:108322603 303.523