Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2905 ATGAAGGCATCTCTAAGACTTCTcttcataatttcttttcttgcttCATTCTTCCTTGCAAGTCCAGAAGCCGACTCGTGTACCAGCAATCTAAGCCTCAATGTTTCTATCCCTTTTGATACAACCAACCTTCACTGCCTTACTGTATGGGATGCTCAAAGTTTCATCCTCAGATATTATCAGACTTCTCCAAACATATGGAGCTTCATTCTCTCAGCACCAAATCCAAATTCTTACATAGCAATGGGGTTCTCTCCCAATGGAGGCATGATGGGTTCAAGTGCCATTGTGGGGTGGATCTCATCCAGTGGGGCTGGTGGAGGCATGAAGCAGTATTATCTAACAGGACCTACACCAAACCAGGTGGTGCCAGATAGAGGCAACTTAAAAGTTCTCACCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGGCCTTCCAGTTAGATACCAACCAACCACTGTCCCGGCTGATTTATGCATTTGGACCAAACGGTGTCTTCCCTTCGGCACCAAGTTTTGCATTAACTCAGCACCAAGACAAAGTTTCCATTACGTTGAATTACGCCACAGGCTCAAGTGCATCAGGAAGCCCATATATGAACCTGAAAAGAAGCCATGGAGTGTTGAATATCTTGGGATGGGGCATCCTAATTATAATGGGAGCAATAGTTGCTCGCTACTTCAGGGAATGGGAtccattttggttttatttcCACGCTACAGTTCAATCCTTGGGTTTTGTTCTGGGAGTAATTGGTGTAATTAGTGGTCTTGTATTGAATAATCAACTCCATATTGACGTTAGTCTTCACAAGGCTCTTGGAATCATCATTCTCGTTCTAGGGTGCCTccagGTATTAGCCATTATATTACGACCAGGAAAGGAATCGAAGATACGGAAGTATTGGAATTGGTACCATCATAACGTGGGGAGGATTTTGATTATCTTCGCAGTGTTTAACACCTTCTATGGACTCCATTTAGGAGGGGAAGGATCTAAGTGGTTTCTGGCTTATGGAGTTACTATTGCCGTCTTAGTCATTATCGTTGTCATTTTGGAGATAAGAATGCGGATCATTGCAAGAAAAGAGACTCGGTCCAAAGAAACCTCATCATTTCCTCGATCCATGGAGTTAGcttattaa 1155 0.4165 MKASLRLLFIISFLASFFLASPEADSCTSNLSLNVSIPFDTTNLHCLTVWDAQSFILRYYQTSPNIWSFILSAPNPNSYIAMGFSPNGGMMGSSAIVGWISSSGAGGGMKQYYLTGPTPNQVVPDRGNLKVLTNSTFITSQSSRLYMAFQLDTNQPLSRLIYAFGPNGVFPSAPSFALTQHQDKVSITLNYATGSSASGSPYMNLKRSHGVLNILGWGILIIMGAIVARYFREWDPFWFYFHATVQSLGFVLGVIGVISGLVLNNQLHIDVSLHKALGIIILVLGCLQVLAIILRPGKESKIRKYWNWYHHNVGRILIIFAVFNTFYGLHLGGEGSKWFLAYGVTIAVLVIIVVILEIRMRIIARKETRSKETSSFPRSMELAY 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2905 384 CDD Cyt_b561_FRRS1_like 186 343 - -
Ssu4g2905 384 Gene3D - 184 374 - -
Ssu4g2905 384 CDD DOMON_DOH 45 186 IPR045266 -
Ssu4g2905 384 PANTHER BNAC01G39800D PROTEIN 10 361 - -
Ssu4g2905 384 SMART DOMON_3 79 165 IPR005018 -
Ssu4g2905 384 ProSiteProfiles Cytochrome b561 domain profile. 172 365 IPR006593 -
Ssu4g2905 384 PIRSF UCP037471 1 381 IPR017214 -
Ssu4g2905 384 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 10 361 - -
Ssu4g2905 384 ProSiteProfiles DOMON domain profile. 53 165 IPR005018 -
Ssu4g2905 384 SMART 561_7 208 329 IPR006593 -
Ssu4g2905 384 Pfam Eukaryotic cytochrome b561 209 329 IPR006593 -
Ssu4g2905 384 SUPERFAMILY CBD9-like 61 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2905 Ssu-Chr4 74181312 74200340 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2905 - - gmx:100804791 538.495