Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2898 ATGAAACTTGTTGTTAACATGATAATGGGCAGTATGATGAATGCTTTCTCTGAGGGACTCACACTAGCTGAAAGAAGTGGTTTGAACCCTGGAACTCTTCTTGATGTGCTGGATCTTGGTGCCATGAGTAACGGCATGTTTAGATTGAAAGGACCTACAATGCTCCAAAACAGTTACTCCCCAGCTTTTCCGCTGAAACACCAGCAGAAGGACATGAGATTAGCTCTTGCCCTTGGAGATGAAAATGCTGTATCAATGCCTGTTGCAGCTGCAGCAAATGAGGCTTTCAAGAAAGCCAGAAGCATGGGGTTGGGAGACCTTGATTTTTCAGCAGTTCATGAGACTTTGAAAGCACCTGATCATTCATCTTAA 372 0.4382 MKLVVNMIMGSMMNAFSEGLTLAERSGLNPGTLLDVLDLGAMSNGMFRLKGPTMLQNSYSPAFPLKHQQKDMRLALALGDENAVSMPVAAAANEAFKKARSMGLGDLDFSAVHETLKAPDHSS 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2898 123 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 1 114 IPR029154 GO:0051287
Ssu4g2898 123 Gene3D - 1 121 IPR013328 GO:0016491
Ssu4g2898 123 PANTHER OXIDOREDUCTASE GLYR1-RELATED 1 116 - -
Ssu4g2898 123 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 1 117 IPR008927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2898 Ssu-Chr4 74014338 74015806 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2898 K18121 - gmx:100802847 235.728