Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2894 ATGGCAATATCTCTGCTGAAAACCTCACCCAACGTGTTCAACAGACACCACAATCACCTCGCATTCTTCTCCAATGGCGCTAGTGCAAGGAGCAATGTCCCCATTTCGCAGAAGAGGAGATCGCGTTTGTTCCCCGTAGTGTCAATGGCAGCCACACCGGTTCAAACTTTTCTTGAAAAATCTGCGCCTTCGTCCCCAAACACTGGTCTTCCAATAATGgttAATGCATGTACTGGAAAAATGGGAAAGGCTGTGATTAATGCGGCAGAAGCTGCTGGACTGCATGTTGTTCCTGTGTCATTTGGGTGTGAAGAGGAGTCTGGGCAGACTTTTCAGATCGCTGGAAAGGAGTTTCTCGTGCATGGTCCTTCTGACAGGGAGAGTGTTCTTGCATCTGTCCTTGATAAATATCCAAATTTGATTGTTGTGGACTACACAGTACCTAATGCAGTCAATGGCAATGCAGAGTTATACTGTAAGGTTGGGGTGCCCTTTGTGATGGGGACCACTGGAGGAGATAGGGACTTGTTGCATAAGACTGTTGAAGACGCAAAGATATATGCTGTGATATCCCCACAGATGGGAAAGCAGgTTGTTGCTTTTCTTGCAGCTATGGAAATTATGGCAGAGCAATTTCCTGGAGCCTTCTCTGGGTATTCCTTACAGGTATTGGAGTCCCATCAAGCAAGCAAAGTTGATGCATCTGGAACTGCAAAGGCTGTAATTTCTTGCTTCAACAAACTGGGGGTGTCTTTCAATATGGATCAGATAAAATTGATCAGGGATCCCAAGCAACAACTTGAAATGGTTGGAGTCCCAGCGGAGCATTTGTCTGGTCATGCATTTCACATGTATCATTTGACATCACCAGATGACACAGTTACATTTGAATTTCAACATAATGTATGTGGTAGATCAATATATGCAGAGGGCACTGTTGATGCTGTAATTTTTCTTGCTAAGAAGATTGAAACAAAGGATGACAAGAGAGTGTATAATATGATTGATGTCTTGAGAGAGGGTAATATGCGATGA 1035 0.4377 MAISLLKTSPNVFNRHHNHLAFFSNGASARSNVPISQKRRSRLFPVVSMAATPVQTFLEKSAPSSPNTGLPIMVNACTGKMGKAVINAAEAAGLHVVPVSFGCEEESGQTFQIAGKEFLVHGPSDRESVLASVLDKYPNLIVVDYTVPNAVNGNAELYCKVGVPFVMGTTGGDRDLLHKTVEDAKIYAVISPQMGKQVVAFLAAMEIMAEQFPGAFSGYSLQVLESHQASKVDASGTAKAVISCFNKLGVSFNMDQIKLIRDPKQQLEMVGVPAEHLSGHAFHMYHLTSPDDTVTFEFQHNVCGRSIYAEGTVDAVIFLAKKIETKDDKRVYNMIDVLREGNMR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2894 344 Gene3D - 72 338 - -
Ssu4g2894 344 TIGRFAM dapB_plant: dihydrodipicolinate reductase 72 344 IPR011859 GO:0008839|GO:0009089|GO:0070402
Ssu4g2894 344 Pfam Dihydrodipicolinate reductase, C-terminus 198 338 IPR022663 GO:0008839|GO:0009089
Ssu4g2894 344 Gene3D Dihydrodipicolinate Reductase; domain 2 196 303 - -
Ssu4g2894 344 PANTHER DIHYDRODIPICOLINATE REDUCTASE 43 344 IPR023940 GO:0008839|GO:0009089
Ssu4g2894 344 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASE 1, CHLOROPLASTIC-RELATED 43 344 - -
Ssu4g2894 344 Pfam Dihydrodipicolinate reductase, N-terminus 71 194 IPR000846 GO:0008839|GO:0009089
Ssu4g2894 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 70 338 IPR036291 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2894 K00215 - gmx:100819889 625.165