Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2892 ATGCGATTTTCGCGGTGGATTTGGGTTGTGACGTGGTGTCCTGTTTTTTCTTCCAATGCCTTCGTTTCTAGCTACCGACAAAATGACGTGTCCCCGCATTCACATGTTCTTTACTACGCTACAAAGAGTGGGCCTCAACCTACTTTTTCTACTGGACCATTTTGCCCCTACCCGCCGCTCTTTTTGCCTTCAGCCATGGCATTTTTTCGTCTGTTCACACTTGCGAATGTCCTCTCATTATTGTTAGACTATGTCATCTCAACTCAGGGTCTTGGATTGCCATTTTTGAGCCCATATCTGCAGTCAATTGGATCGGACTCTACACATGGGGCTAACTTTGCATCTTCATCCTCCACTGTGCTTGAGCCCATTACTTCCTTCTTTGTCAGTGGGCTCAGCCCATTTTCCCTTTCCATACAACTCAGGCAAATGGAGCAATTCAAAGCTAGAGTTGATGGATTTTATCGATCAGGTACACAAAAAATGTTGCTAGAAATTTGCATTggtttttattcaataataatatactcACCTACAAGTCTTCCTTTCCATGCACGACACAGGAACAAGGATATCATCTGGTTGTTCCTCAGGAACGAAAATTCCTTCACCAGATATATTCGGAAAGGCCATTTACACCTATATGCACAAGGGGGGCGTACATTTATGGCATTCAATCTTGGTCCGGTGGGATGCTATCCTGGATACTTGGTGGAGCTTCCTCATGCTACTTCTGACTTTGATGAGTTTGGATGCATGGTTTCTTACAACAATGCTGTAAATGATTATAACAAACTGTTGAAGGATACATTGACTCAAACCAGAGAAAGTTTATTAGATGCTTCCCTTATTTACGTGGACACCTACTCTGCTCTGTTGGAGCTCTTTCACCATCCCCCATATTATGGATTGAAGGATGGTACCAGAGCATGTTGTGGGCATGGAGGCGGTGACTACAACTTTGACCCTAAAATTTTGTGTGGCAATATAATTGCAAGTGCATGTGATGAACCCCAAAACTATGTGGGTTGGGATGGCATCCATTTCACAGAAGCAGCGAACAAGATTGTTGCACTGGCTATTCTCAACGGCTCTCCTTTTGACCCCCCTTTCCCTCTTCATAAACACTGTGAACTCCAGCCTATTGGTTGA 1152 0.4323 MRFSRWIWVVTWCPVFSSNAFVSSYRQNDVSPHSHVLYYATKSGPQPTFSTGPFCPYPPLFLPSAMAFFRLFTLANVLSLLLDYVISTQGLGLPFLSPYLQSIGSDSTHGANFASSSSTVLEPITSFFVSGLSPFSLSIQLRQMEQFKARVDGFYRSGTQKMLLEICIGFYSIIIYSPTSLPFHARHRNKDIIWLFLRNENSFTRYIRKGHLHLYAQGGRTFMAFNLGPVGCYPGYLVELPHATSDFDEFGCMVSYNNAVNDYNKLLKDTLTQTRESLLDASLIYVDTYSALLELFHHPPYYGLKDGTRACCGHGGGDYNFDPKILCGNIIASACDEPQNYVGWDGIHFTEAANKIVALAILNGSPFDPPFPLHKHCELQPIG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2892 383 Gene3D SGNH hydrolase 38 365 IPR036514 -
Ssu4g2892 383 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 77 381 - -
Ssu4g2892 383 Pfam GDSL-like Lipase/Acylhydrolase 88 360 IPR001087 GO:0016788
Ssu4g2892 383 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 77 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2892 Ssu-Chr4 73924150 73930875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g2892 91 380 Acyl Lipid Metabolism Gene Families AT4G10950 25.649 1.68e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2892 - - aprc:113850566 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2892 4 73924150 73930875 Ssu4g2892 4 73924150 73930875 ECH