Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2890 ATGGGATATGGGCCGGCCCAAAAGAAAAATTCGATGGGCTGGCCCAGGATAAGACGCAGACCTAAGAGCATGTTTGGATTACGTATCGTAGATACACACACTGATGGGATGTGGATTTTGAAGATAGGGAAGTGGCCAATGAGGAAGCGACGTTCGTCCACGTGTCGAGTGGTTGGCATCGGTGTCCCAGATTGTTTTATGGTAGTGGATAACAAGTCAATGCAAACAACATGTgcttctcttgtttttttattatttcctatATCTATTGAATTTGAAGGAAGGGACTATAGGAACAAAGTGAGACCAACCAAAGTGCAGATTTTCGGTTTGGGGATAGATAGGGTGATAGGCATCACACTCTTCGCATTTTTCTTAAagTGGGATGCTGTTGAAAACAAGTCCACAGTACTTCTTTATGGCGGTGGGGCTATAGTTGCTGTTTGGCTATCTTCGATTCTTGTGAGTGCCATCAACTCAGTTCCCTTGCTTCCAAAGATTATGGAGTTGGTAGGGCTAGGGTACACTGGGTGGTTTGTCTACCGATACCTCCTGTTTAAGTCTAGCAGGAAGGAGCTAGCTACAGACATTGAGgcattgaagaagaaaatttcTGGAACTGAATAG 627 0.4179 MGYGPAQKKNSMGWPRIRRRPKSMFGLRIVDTHTDGMWILKIGKWPMRKRRSSTCRVVGIGVPDCFMVVDNKSMQTTCASLVFLLFPISIEFEGRDYRNKVRPTKVQIFGLGIDRVIGITLFAFFLKWDAVENKSTVLLYGGGAIVAVWLSSILVSAINSVPLLPKIMELVGLGYTGWFVYRYLLFKSSRKELATDIEALKKKISGTE 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2890 208 PANTHER MEMBRANE PHOSPHOPROTEIN 14 KDA, CHLOROPLAST, PUTATIVE-RELATED 127 208 - -
Ssu4g2890 208 PANTHER - 127 208 IPR033344 GO:0009579
Ssu4g2890 208 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 127 206 IPR025564 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2890 Ssu-Chr4 73913332 73916618 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2890 - - minc:123223560 160.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2890 4 73913332 73916618 Ssu4g2890 4 73913332 73916618 ECH