Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2881 ATGGAATGGATGGTTACCCTTCGATATAAAGGTGCCCCAAACTTGATTCATGATGGATATGGAACAAGAAACCAGAAACAGGAGTCTGAGAATAGTAGAAGGGAATCTGAAGATGGGAAAATGGACCAGAAACACCAAAATGAACACAAGACATTGGAATTCCCGTTCCCTATCTTCTGGCTGCCTTACTACAATAACCAGGAGGAAAGTGGAAAGACTAATAACCAGGAGAACACTTTTTCACCTAAAATTATTGAGGAGTTACCACATACATTCAAATCTGTTCCAGTAAAGTCTCACGTTGATGAAGGTGTAACGAACGGAACCGGATCAAATCAAACTGAATACAAAAATACAGGTGCTTCAGATGTTGTAGAGAAAGTGACTAATGCCAGAAGCATGCCTGTGAAGCAGATAGAATCGCATCAAGGAAAAAATGACTCAGAGGGAAATCAACTAAGAGAAGTGAATGTTTCTCTAAATCAAACGGAAGACAATGTGTCTAAAAAGGACTCCTGCACTGGTGACAAAAAGAGACAATCTATATCCTCACCAAAAGGATCCAAGTTACGTCCAGTTTGTCTGAGAGTTGATCGACTACCAAGGAAGAAAGATGGTGATGGGAGTTCGAGATCCCCAAGTCCACCTTCCTCAAAAGAATGTTCCCAAGCTACCGCTGGTGAAACATTCAAGACTCCTGTGGCTGTGAGTAGCACAAATGACAAGGCTCAACCAAATTCGAATCATCAGAATGCTCCAAACAACATCGAAAAAGTTGAACCAAAGGAGAAAACGATTCAGGTGTCTGAATATAAGGCTAATGAAAACAAGGGTGTTGACTGTAGGGATGGATGTCAGAGCCAGATAAATGTAAACATACCCAGTGAAGATCCGAAAGGGACAAAGGAAACCTGTGCAGATGTTGATGAATATAAGACTGAAGATAAAAAGGCAGAGAAAGGAGCAGAAAATATGATGGAGGAAACTGCAGAACTAAGGGAAGTGAAGAATTCAAGCACACCAACTGATGCAAATCGAAAAGAAGGAAGAGTTTTGTCAGATGCAGATGCTGCTCTTTTGATACAAGCTGCATATCGTGGTTATCAAGTTAGAAAATGGGAACCACTGAAGAAATTGAAGCAGATAGATGATGTCAGAAAGGAGGTGACTGATGTTCGAGGCCATGTTGAAGCTTTTGAGAGATCTTCTGATCTTCAAAATGATGACAAACAAAAAATTGCAATTGGAGAGACCATAATGAGACTCCTACTGAAGTTGGATACTATACAGGGTTTGCATCCAAGTTTCAGGGAGATCAGAAAATCCTTGGCTAGAGAGCTCACAATCTTGCAAGAAAGGCTTGATTCTATAATGGCCAAGAAAACTCGGCAGCAGATACAGGATTTCGGTGTTCAGAAACATGTTGAAGTCACTCCAATGAATATGCAGAATGAAGAACATGTGCAAAaggagcaagaagaagaagtttATTTACCAGGAGATTCATCTGAAGACATTACTGGTGATGTAAAAGGTCCTCGTGCTAATGATGGCGAAAGTGAATCTCGGTCACCAGTTGATCCTGCAGCAGATGAGGGACCAGAGCCCATTGTACTTCCAAATGGATTGGATAATGATGATAAAAGCCAAGTGTTTACTGCCCATGCGTTGAATTCTGCAAGCGATCTATCTGAGATTGACACAATGGCTGTGGAACCTGAAGCTAAGTCAAAAGCAAACGACATTCCCATTGAGGTTGATAATTTGGATATGACTGTTTGGGAAGAATTGCCTGTGGGAGTTATTGATGAAGACATCAACGATATTAGTACTGAGAAGAATGAACATGATGATATTTGTTCTGAAAGTCTGCCAGCTATGGTGGATAATTCTGCACATGATGAGTTAGACTCACATGTAATGATGGAATTACCAGTGGGATTGCTTGATGAGGATGAAAGGGACAATGAAATGAATATTTCTGAAGGAGAagcacaaaatgaaaatgagatatTTATTGAGGAACTTCCCCTTGGGACTACTTGA 2046 0.3988 MEWMVTLRYKGAPNLIHDGYGTRNQKQESENSRRESEDGKMDQKHQNEHKTLEFPFPIFWLPYYNNQEESGKTNNQENTFSPKIIEELPHTFKSVPVKSHVDEGVTNGTGSNQTEYKNTGASDVVEKVTNARSMPVKQIESHQGKNDSEGNQLREVNVSLNQTEDNVSKKDSCTGDKKRQSISSPKGSKLRPVCLRVDRLPRKKDGDGSSRSPSPPSSKECSQATAGETFKTPVAVSSTNDKAQPNSNHQNAPNNIEKVEPKEKTIQVSEYKANENKGVDCRDGCQSQINVNIPSEDPKGTKETCADVDEYKTEDKKAEKGAENMMEETAELREVKNSSTPTDANRKEGRVLSDADAALLIQAAYRGYQVRKWEPLKKLKQIDDVRKEVTDVRGHVEAFERSSDLQNDDKQKIAIGETIMRLLLKLDTIQGLHPSFREIRKSLARELTILQERLDSIMAKKTRQQIQDFGVQKHVEVTPMNMQNEEHVQKEQEEEVYLPGDSSEDITGDVKGPRANDGESESRSPVDPAADEGPEPIVLPNGLDNDDKSQVFTAHALNSASDLSEIDTMAVEPEAKSKANDIPIEVDNLDMTVWEELPVGVIDEDINDISTEKNEHDDICSESLPAMVDNSAHDELDSHVMMELPVGLLDEDERDNEMNISEGEAQNENEIFIEELPLGTT 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2881 681 MobiDBLite consensus disorder prediction 481 548 - -
Ssu4g2881 681 MobiDBLite consensus disorder prediction 159 263 - -
Ssu4g2881 681 SUPERFAMILY BAG domain 373 457 IPR036533 GO:0051087
Ssu4g2881 681 Gene3D BAG domain 363 463 IPR036533 GO:0051087
Ssu4g2881 681 MobiDBLite consensus disorder prediction 23 49 - -
Ssu4g2881 681 ProSiteProfiles BAG domain profile. 381 458 IPR003103 GO:0051087
Ssu4g2881 681 MobiDBLite consensus disorder prediction 14 49 - -
Ssu4g2881 681 Pfam IQ calmodulin-binding motif 356 373 IPR000048 GO:0005515
Ssu4g2881 681 MobiDBLite consensus disorder prediction 192 209 - -
Ssu4g2881 681 MobiDBLite consensus disorder prediction 103 124 - -
Ssu4g2881 681 Pfam BAG domain 382 456 IPR003103 GO:0051087
Ssu4g2881 681 MobiDBLite consensus disorder prediction 210 255 - -
Ssu4g2881 681 ProSiteProfiles IQ motif profile. 354 383 IPR000048 GO:0005515
Ssu4g2881 681 PANTHER BAG FAMILY MOLECULAR CHAPERONE REGULATOR 6 36 679 - -
Ssu4g2881 681 SMART BAG_1 381 458 IPR003103 GO:0051087
Ssu4g2881 681 Coils Coil 440 460 - -
Ssu4g2881 681 PANTHER BAG DOMAIN CONTAINING PROTEIN, EXPRESSED 36 679 IPR040400 -
Ssu4g2881 681 MobiDBLite consensus disorder prediction 104 124 - -
Ssu4g2881 681 MobiDBLite consensus disorder prediction 507 528 - -
Ssu4g2881 681 Coils Coil 308 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2881 Ssu-Chr4 73603911 73606375 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2881 - - gmx:102668563 937.947