Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2877 ATGGGTTCCTTGGAATCTGGGATCCCATTGAAGAAATCGAGCTTGTTTGGTCCTCAGCTCAGCAGAAAGGAGAAGAACCCTTTTTCCCACAGGTTCAGATCGAGCTTCTCGAGGTTACTCTTCAAGAAGCTCGATTACGTGCAATGGATTTGCACGGTGGTGGTGTTTCTGTGCCTGGTCGTTGTGTTCCAAATGTTCCTGCCAGGTTCGGTTCTGGAAAACGAGGGGGAAGAGTCCTTGAAAGCCGTGAAAATGCGGTCTGAGAGTTTGTTTCATTATGGAGACTTTAACAAGGTTGTGTTGGACATTGGGGAGGATGCTGTCTTTTTGCCTAAGATTTCGGAGAAATTTAGGAAAGGTGGGGATGTGGATTTGCTTAACCACACAGTGCAGCATTTTGGGTACAGGAAGCCTCAGTTGGCATTGGTGTTTGGAGAGCTGTTGGTTGATTCACAACAATTGCTTATGGCAACAGTTGCAGCTGCTTTGCTAGAGATTGGCTATGACATTCAGGTCTTTTCACTTTTAGATGGACCAGGGCATCATGTGTGGAGAAATTTAAGAGTTCCCATAACTGTCATTAGAACTTGTGATAAGCGAAACAACACTGTAGACTGGCTAAACTATGATGGTATAATTGCGAGCTCTCTTGAAGCCAAGGGTGCCTTTTCTTGTTTTTTGCAGGAACCTTTCAAGTCTATCCCTCTTATATGGGTTGTTCATGAAAATGCCCTTGCTTATCAATCAAGACGATATACTACTAATGGGCAGATTGAACTTTTGAATGATTGGGGAAGAGTTTTCAATCGTTCAACGGTTGTTGTCTTTTCAAACTATGCCTTGCCGATGATTTACTCCACatttgatggtggaaatttttATGTCATTCCTGGTTCCCCTGCCGAAGTATTAGAAGCAGAAGCATTTATGGCCTTACAGAAAGATAATTTGCGCGTCAATGTGGGCTATGGCCCAGAAGATGTGGTTATTGCAATTGTGGGCAGTCAATTTTTGTACAAGGGCATGTGGTTGGGGCATGCCATTGTTTTACGGGCTTTAGAACCACTGTTGGGAGACTTCTTTTTAACCAAAGATAATTCCAGTGCACAACTACGAATCATTGTTCATAGTGGGGAATTAACAAATAACTACAGTGTGGCTCTTGAGACCATGGCGCATAGCTTGAAATATCCAAGAGGTGTTATAGAGCATATAGCTGGAGCTTTGAATGCCGATTCTGTTCTTGGCACCGCAGATGTTGTGATCTATGGATCATTTCTTGAAGAACTGTCTTTTCCAGAGATTTTGATCAAAGCTATGTCGTTTGAGAAACCAATTATTGCTCCCAATGTTCCCATGATCAGAAAATATGTTGATGACAGGGTAAATGGCTACCTTTTCCCAAAGGATAATGTAAGAGTTTTGAGACAAATTTTGTTAGAAGTGATCTCAAAAGGGAAAATATCACCCTTGGCTCGTAACATTGCCTCAATAGGGAGAAGTACTGCAAAGAATCTTATGGTTTCAGAAGCAATTGATGGATATGCATCTTTACTTCAGAATATTCTCAGGCTTCCATCGGAGGTTGCTCCACCTAAGGCTGTTTCAGAAATACCTCCCAATGTTAAAGAACAATGGCAGTGGCATTTGTTTGAAGCTGTTCCAAATATTACATATCAAAATAGGGAACTAAGAAGTAACACGTTTTTAGATAAATACGAGGGCCAGTGGAATCATTCTCAAAAAAATAGATCCACTACTACAGTTGCAGCTAGCGATATATTTGTATATAGCAtatgggaagaagaaaaatataccCAACTGGCTATTACCAAAAAAGGAGGGAGGATGAAGAGAACAGAGCAGTCACATGGAACATGGGAGGATGTATATAAAATTGCTAAGAGGGCTGATAGATCAAAGAATGATTTACATGAAAGAGACGAAGGAGAGCTTGAGCGGACAGGACAACCATTATGCATTTATGAACCTTATTTTGGGGAAGGATCCTGGCCTTTTCTACATCAAAAATCTCTTTATCGAGGAGTTGGTCTGTCCGGTAAAGGTCGAAGACCAGGGAGAGACGATGTTGATGCTCCTTCTCGTCTTCCACTGCTTAATAGTGGTTACTATCGAGATTTACTTGGTGAATATGGGGCCTTCTTTGCAATTGCAAACAAGATTGACCGTTTACACAAAAATGCTTGGATTGGATTTCAGTCTTGGAGAGCAACAGCAAGGAAGGCATCTTTGTCCAGAACTGctgaaaatgaattattaaatgcCATCCAATCCAAAAAGTATGGGGATGCACTATATTTTTGGGTGCGCATGGATATGGATTCACGAAACCCTTTGCAAAAGGACTTTTGGTCATTTTGTGATGCCATTAATGCGGGAAATTGCAAGTTTGCTTTCTCAGAGGCCATGAGGAAAATGTATGGGTTAAAAGATGATGTGGATTCTTTGCCTCCCATGTCTGTAGATGGTGACACATGGTCTGTTATGCAGAGTTGGGCTCTGCCTACGAGATCCTTTATGGAGTTTGTAATGTTCTCCAGAATGTTTGTGGATGCATTGGATGCGCAAATGTATGATGAACACCATTCAACAGGACACTGTGCTTTGAGTTTGTCAAAAGATAAGCATTGTTATTCACGGCTTCTTGAGCTTCTTGTAAATGTGTGGGCATACCACAGTGCTAGGAGGATGGTGTTTGTGGACCCTGAGACTGGTCTAATGCAGGAACAACACAAGTTCAAGAGCCGCAAAGGTCAAATGTGGATCAAATGGTTCTCATACAGCACACTTAAGAGCATGGATGAGGACTTGGCAGAGTTATCGGATTCTGAGGATCCTGGCAGGCATTGGTTGTGGCCATCAACGGGTGAAGTATTCTGGCAAGGTgtatatgagagagagagaagcttAAGGCACAAGGAGAAGGAAAAGAGGAAGCAAAAGAGTATAGAAAAACTAAACAGAATGAGGAAGCGTCATCGCCAACAAGTGATAGGGAAATACATTAAGCCCCCACCAGATGAGGAAAGCTCTAATTCTTCTATGCTTGCAGTAACAGCACCATGA 3087 0.4114 MGSLESGIPLKKSSLFGPQLSRKEKNPFSHRFRSSFSRLLFKKLDYVQWICTVVVFLCLVVVFQMFLPGSVLENEGEESLKAVKMRSESLFHYGDFNKVVLDIGEDAVFLPKISEKFRKGGDVDLLNHTVQHFGYRKPQLALVFGELLVDSQQLLMATVAAALLEIGYDIQVFSLLDGPGHHVWRNLRVPITVIRTCDKRNNTVDWLNYDGIIASSLEAKGAFSCFLQEPFKSIPLIWVVHENALAYQSRRYTTNGQIELLNDWGRVFNRSTVVVFSNYALPMIYSTFDGGNFYVIPGSPAEVLEAEAFMALQKDNLRVNVGYGPEDVVIAIVGSQFLYKGMWLGHAIVLRALEPLLGDFFLTKDNSSAQLRIIVHSGELTNNYSVALETMAHSLKYPRGVIEHIAGALNADSVLGTADVVIYGSFLEELSFPEILIKAMSFEKPIIAPNVPMIRKYVDDRVNGYLFPKDNVRVLRQILLEVISKGKISPLARNIASIGRSTAKNLMVSEAIDGYASLLQNILRLPSEVAPPKAVSEIPPNVKEQWQWHLFEAVPNITYQNRELRSNTFLDKYEGQWNHSQKNRSTTTVAASDIFVYSIWEEEKYTQLAITKKGGRMKRTEQSHGTWEDVYKIAKRADRSKNDLHERDEGELERTGQPLCIYEPYFGEGSWPFLHQKSLYRGVGLSGKGRRPGRDDVDAPSRLPLLNSGYYRDLLGEYGAFFAIANKIDRLHKNAWIGFQSWRATARKASLSRTAENELLNAIQSKKYGDALYFWVRMDMDSRNPLQKDFWSFCDAINAGNCKFAFSEAMRKMYGLKDDVDSLPPMSVDGDTWSVMQSWALPTRSFMEFVMFSRMFVDALDAQMYDEHHSTGHCALSLSKDKHCYSRLLELLVNVWAYHSARRMVFVDPETGLMQEQHKFKSRKGQMWIKWFSYSTLKSMDEDLAELSDSEDPGRHWLWPSTGEVFWQGVYERERSLRHKEKEKRKQKSIEKLNRMRKRHRQQVIGKYIKPPPDEESSNSSMLAVTAP 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2877 1028 MobiDBLite consensus disorder prediction 1014 1028 - -
Ssu4g2877 1028 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 152 520 - -
Ssu4g2877 1028 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1020 - -
Ssu4g2877 1028 MobiDBLite consensus disorder prediction 978 1028 - -
Ssu4g2877 1028 CDD GT4_PimA-like 156 520 - -
Ssu4g2877 1028 Pfam Glycosyl transferases group 1 410 496 IPR001296 GO:0016757
Ssu4g2877 1028 PANTHER GLYCOSYL TRANSFERASE FAMILY 1 PROTEIN 1 1020 - -
Ssu4g2877 1028 Coils Coil 979 1003 - -
Ssu4g2877 1028 Gene3D Glycogen Phosphorylase B; 306 506 - -
Ssu4g2877 1028 MobiDBLite consensus disorder prediction 991 1005 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2877 Ssu-Chr4 73519294 73527390 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2877 - - gmx:100807455 1847.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2877 4 73519294 73527390 Ssu4g2877 4 73519294 73527390 ECH