Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2870 ATGGCTACCAATTCCATTTCCTCATCCTCCTTCCGATTAGTCACAACCCGAATCCCTCTCTCCCTTTTCCGCCAAACCCCAACACTTCTCCCAACCCCCACAAGCCCCCTCTTCCCCTTCAAACCCATCACCTTCCAGAGACTTCCCCCAACCCCATCATcgtcatcatcaccatcaccatccaCATCCCTCCAACCCGTCGAAGACCTCCCTCCGAAGCTCCAAGAAATCGTGCACCTCTTCCAGTCCGTCCCGGAACCGAAGGCCAAGTACGAGCAGCTCCTCTTCTACGGCAAGAACCTCATACCCCTCGACTCCCGATTCAAGACCAACGACAACAAGGTCCAAGGCTGCGTCTCCCAGGTCTGGGTCCGAGCCTACCTCGACCCGAACCGCAACGTCGTCTACGAGGCCGACTCCGACTCCGTCCTCACCAAGGGCCTCGCCGCGCTGCTCGTTCAGGGCCTCTCGGGCCGGCCCGTTAACGAAATCATTCGGGTCACGCCCGATTTCGTCACGCTTTTAGGGCTGCAGCAGAGCTTAACCCCTCGCGGAACAACGGAGGAAGGCGCTTATGCTATACGTGGAAGCCGAAAAGGGCGGGGAAGGTGGCGGAACGGTGATTCTGAGACAGCGTCACGTGGTGATTATGTGGAATTGGGGGGGAGGGGGAAGAGGATAAGGGAGAGGTTGGAGAGGGAGCTTGAGCCGGTGGAGTTGGAGGTTGAGGATGTGTCTTATCAGCACGCGGGGCATGCTGGGGTTAGAGGGGGTGATGGGGAGACGCATTTTAATGTGAAGGTGGTGTCTAGGGAGTTTGAAGGGAAGAGCTTGGTTAAGAGGCATAGGCTTGTTTATGGCTTGCTGCGAGAGGAGTTGGAGTCTGGACTGCATGCCTTGTCGATTGTGGCGAAGACGCCGGCCGAAGTTGGCGAAGGGTAA 942 0.5616 MATNSISSSSFRLVTTRIPLSLFRQTPTLLPTPTSPLFPFKPITFQRLPPTPSSSSSPSPSTSLQPVEDLPPKLQEIVHLFQSVPEPKAKYEQLLFYGKNLIPLDSRFKTNDNKVQGCVSQVWVRAYLDPNRNVVYEADSDSVLTKGLAALLVQGLSGRPVNEIIRVTPDFVTLLGLQQSLTPRGTTEEGAYAIRGSRKGRGRWRNGDSETASRGDYVELGGRGKRIRERLERELEPVELEVEDVSYQHAGHAGVRGGDGETHFNVKVVSREFEGKSLVKRHRLVYGLLREELESGLHALSIVAKTPAEVGEG 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2870 313 PANTHER SUFE-LIKE PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 32 183 - -
Ssu4g2870 313 SUPERFAMILY SufE/NifU 68 183 - -
Ssu4g2870 313 SUPERFAMILY BolA-like 225 311 IPR036065 -
Ssu4g2870 313 Gene3D - 221 310 IPR036065 -
Ssu4g2870 313 PANTHER - 32 183 - -
Ssu4g2870 313 Pfam Fe-S metabolism associated domain 80 184 IPR003808 -
Ssu4g2870 313 Gene3D - 60 188 - -
Ssu4g2870 313 PANTHER - 209 311 - -
Ssu4g2870 313 MobiDBLite consensus disorder prediction 48 68 - -
Ssu4g2870 313 PANTHER SUFE-LIKE PROTEIN 1, CHLOROPLASTIC/MITOCHONDRIAL 209 311 - -
Ssu4g2870 313 Pfam BolA-like protein 231 309 IPR002634 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2870 Ssu-Chr4 73440717 73441743 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2870 K22066 - pop:18103535 339.732