Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2866 ATGGAGAGGTGTTTACTGTTTTATCTTTATACCGGGTGTTCTTGCTCTTCTCCTCTCTGCTGCTGCCATGCCAAGTTCTTCTCCTTCAAATCATTTCTTGGTACTGAATCTTTATACTCAAATCTGAATCCTGAGGTCCCAAATGGGAATCAAAATGAAGTGATGATGATAACTGTGCAAATTgtgattcaaaaaattgaagaggAATTGGACAAACTGGGGGAAGCAAAACAGGATCCATCATCAACCCCATCTGTGTTCCAGCAAGGTGCATTTCTTGCTGATATATTAGGACTTCTTGAGTCTGCGGCGGCATCTCATCCACATGAGGGGAATAATCAGCAGAATGGTAGTTTCTCCATTCATCCTCTGGTGAGAAACAAGAAACAATCTGATGAGCCTGCTGATTACTTTCTGCGAGAAGAGATTCGCAAGTATGTCAGGATCAAGCCTAACAGATtaggaaaacaaaattttatgggGGCAAATGCAAGCTTCACCAGCATAGGACACGCGTGCTTTGCCATGGAGAAAGAGCTAGAAGAATACATGGATTATGATGTTGGTGAGATCTGCAATGATGACTGGAAACTAGCCCAAAAGCTTATGGTTCATGGCTGTGATCCATTACCAAGGAGAAGGTGCTTTTCAAGAGCCCCTAAGCTATACAACAAGCCATTTCCCATCAATGAATCCTTGTGGAAACTCCCTGATGATAGAAATGTTAGATGGAGTCAATACCGGTGCAAGAACTTCGCTTGTCTCGCCGGCAACGCCACTCGTAAGGGATTCTTCAAGTGTGCAGACTGCTTCAATCTCACCAACCATGAGATGCCAAGATGGGTAAGCCTGGAGGCTGATTCAAACCAGACAGCTGATTTCCTTATATATGAGGTTCTTGGAATTAAGCCAGGAGAGATCAGAATAGGATTGGACTTCAGTGTTGGAACTGGGACTTTTGCTGCTAGGATGAGGGAATTCAATGTGACAATAGTTTCAGCCACTATCAACTTTGGGGCACCCTTCAGTGAAATGATAGCTCTTAGAGGACTTGTTCCTCTCTACTTGACCATAAATCAAAGGCTTCCATTTTTTGACAACACCCTGGATTTGATTCACACAACAAGGTTTCTGGATGGGTGGATTGACTTTGTGCTCCTTGACTTTATATTGTATGACTGGGATAGAGTTCTGAGGCCAGGGGGTTTGCTTTGGATTGACAGCTTTTTCTGCTTGAAGGAAGATTTGTATGATTACTTGCAGGCCTTCAAAATGCTGAGATATAAGCAGCACAAATGGGTGGTTGTTCCAAAGCTTGATAAGGATGATCAGGAAATGTTCTTTTCTGCTGTTTTAGAGAAGCCTCCTAGGCCATTCAGGTGA 1383 0.4208 MERCLLFYLYTGCSCSSPLCCCHAKFFSFKSFLGTESLYSNLNPEVPNGNQNEVMMITVQIVIQKIEEELDKLGEAKQDPSSTPSVFQQGAFLADILGLLESAAASHPHEGNNQQNGSFSIHPLVRNKKQSDEPADYFLREEIRKYVRIKPNRLGKQNFMGANASFTSIGHACFAMEKELEEYMDYDVGEICNDDWKLAQKLMVHGCDPLPRRRCFSRAPKLYNKPFPINESLWKLPDDRNVRWSQYRCKNFACLAGNATRKGFFKCADCFNLTNHEMPRWVSLEADSNQTADFLIYEVLGIKPGEIRIGLDFSVGTGTFAARMREFNVTIVSATINFGAPFSEMIALRGLVPLYLTINQRLPFFDNTLDLIHTTRFLDGWIDFVLLDFILYDWDRVLRPGGLLWIDSFFCLKEDLYDYLQAFKMLRYKQHKWVVVPKLDKDDQEMFFSAVLEKPPRPFR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2866 460 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Ssu4g2866 460 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 289 445 IPR029063 -
Ssu4g2866 460 Gene3D Vaccinia Virus protein VP39 280 436 IPR029063 -
Ssu4g2866 460 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 22 459 - -
Ssu4g2866 460 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 301 409 IPR004159 GO:0008168
Ssu4g2866 460 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 22 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2866 Ssu-Chr4 73407990 73409372 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2866 - - gmx:100809058 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2866 4 73407990 73409372 Ssu4g2866 4 73407990 73409372 ECH