Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2864 ATGGTAGAGAGGGAGCAAGCAAGACCCCTAGCCCCATCAATAGAGCGCCCAAGCAGCGACGAGGATGACACCACTCTGCGCCCCCAGACACACGGtcataaaaaattcatcaaacgGTGTGCTTGCCCACTTGCCTTTTTACTTCTCCTAGCAATGGTAATCATAGTTTTGATCTTCACAATATTTCGTGTCAAGGACCCCGTGATCACAATGAACGGTGTCAAGATCACGAAGCTCGAACTTGTCAACACCATAACACCTAAACCCGGGGCTAACATGTCCTTAATCGCAGATGTGTCAGTGAAAAATCCCAACGTTGCATCCTTTAGGTATAGTAACACCACCACAAGTTTGTACTACCGTGGTGTCATGGTGGGGGAGGCTAGAGGACCACCAGGGAGGGCCAAGGCTAGAAGAACAATAAGGATGAATGTCACAGTCGATGTCATCACGGATCGCATCATTTCTATTCCAGATTTTGGGACAGATTTGGGTTCTGGGTTGTTGACTATGTGCAGCTTCTCCAGGGTTCCGGGGCAGGTGAAGATCTTGAACTTGTTCAAGAGACATGTTGTTGTGAAAATGAACTGCTCCACCACCTTCAATATTTCTACACGGGCAATTAAAGAGCAGAGTTGTCAGCGGAAGGTTAAACTTTAG 660 0.4636 MVEREQARPLAPSIERPSSDEDDTTLRPQTHGHKKFIKRCACPLAFLLLLAMVIIVLIFTIFRVKDPVITMNGVKITKLELVNTITPKPGANMSLIADVSVKNPNVASFRYSNTTTSLYYRGVMVGEARGPPGRAKARRTIRMNVTVDVITDRIISIPDFGTDLGSGLLTMCSFSRVPGQVKILNLFKRHVVVKMNCSTTFNISTRAIKEQSCQRKVKL 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2864 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 20 218 - -
Ssu4g2864 219 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 20 218 - -
Ssu4g2864 219 MobiDBLite consensus disorder prediction 1 30 - -
Ssu4g2864 219 Gene3D - 50 171 - -
Ssu4g2864 219 MobiDBLite consensus disorder prediction 15 30 - -
Ssu4g2864 219 Pfam Late embryogenesis abundant protein 99 198 IPR004864 -
Ssu4g2864 219 SUPERFAMILY LEA14-like 48 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2864 Ssu-Chr4 73396784 73397443 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2864 - - gmx:100799820 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2864 4 73396784 73397443 Ssu4g2864 4 73396784 73397443 ECH