Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2862 ATGGTTTTTGAGTGTTGTGGTTTTGATTTTAAGCAGGCAGTGGATACAGCTGTTCGTATTTTGAAAGAAGGGGTAATGGATGCCATAAAACTGGAAGGATGGTCTCCTTCGAGAATTGTTGCAGCAAAGGCTATTGTTGAGGCTGGAATAGCTGTGATGGGGCATGTAGGCCTTACTCCCCAGGCCATTAGTGTTTTAGGGGGGTTTAGACCTCAAGGAAAGAATGTTGCCAGTGCTGTCAAGGTTGTAGAGACAGCATTGGCTTTTCAGGAAGCCGGGTGCTTTTCTGTTGTTCTGGAGTGTGTGCCTGCACCGGTCGCGGCTGCGGCAACAGCAGCCCTTCAAATTCCTACAATTGGAATTGGGGCTGGACCCTTTTGCAGTGGACAGGTACTAGTTTACCATGATCTGCTTGGTATGCTGCAACACCCCCACCATGCAAAGGTTACTCCAAAATTTTGTAAGCAGTATGCGCGTGTAGGAGATGTCATCAATAAAGCCTTACTGGAGTATAAGGAAGACGTGATAAATGGTTCATTTCCTGATGCTCGCCATAGCCCATACAAAATCAGCAAAACAGATGCAGATGTTTTTTCAAATGAGTTGCAAAGGTTAGGTTTGGACAAGGCAGCATCTGCAGTGTCCGAAGCAGTTCAGAAGATGGATACAACCAAATCAATTGGTGAAGGAAACCAAGCAAAATGA 705 0.4567 MVFECCGFDFKQAVDTAVRILKEGVMDAIKLEGWSPSRIVAAKAIVEAGIAVMGHVGLTPQAISVLGGFRPQGKNVASAVKVVETALAFQEAGCFSVVLECVPAPVAAAATAALQIPTIGIGAGPFCSGQVLVYHDLLGMLQHPHHAKVTPKFCKQYARVGDVINKALLEYKEDVINGSFPDARHSPYKISKTDADVFSNELQRLGLDKAASAVSEAVQKMDTTKSIGEGNQAK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2862 234 Pfam Ketopantoate hydroxymethyltransferase 1 182 IPR003700 GO:0003864|GO:0015940
Ssu4g2862 234 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 12 227 IPR003700 GO:0003864|GO:0015940
Ssu4g2862 234 PANTHER 3-METHYL-2-OXOBUTANOATE HYDROXYMETHYLTRANSFERASE 12 227 - -
Ssu4g2862 234 Gene3D - 1 199 IPR040442 -
Ssu4g2862 234 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 3 185 IPR015813 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2862 K00606 - gmx:100808841 395.201