Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2830 ATGGAGACACAATCAGATGGTAATGAGGACACCATAGCCACCATTAAAGATATGAGGCAACAGCTTGAAGCTCGGATAGAGTCCCAACACAAGGCTCACATGGAGATGCTTGCTTCTATACAAGCTGTAATACCTAATCTTGTTTCATCCCTTGACCTTTCTCTTAAGGTTGTCTCTTCTTTCAACCATCGTCCTTTTGCTCCTACACCTTCTTTGCCTTTGCCTGATCCAAAATTGAATCCCAAAAAACATGTTGAACTAACTCACCGTTCTAATGCTGAAACCTGCGCCGATGGCCCTATTGAGGCTGACTTGACAAATCCCAAGAATCAAAAACCCAAAACATTTGTCGATTCAAACCCAGCATGTCAAGTAGAGTCTGAGAAGGTTAGTGCATTAGCGGTGGTTCGATCACTGGTCGCTGTTTGTCTATTAGGGCGAGTGCCCTTCTCACCAATTGATTCTTCCACTATGTCAAGGAAATTGGAAAATGATCAGACGGTGACACCAACTGAGAAGGCTACACTTCAGGAGCTTGGAGGGGATTCAGGGGCAACACTTGCAGTGGAGATAGCTTTAAGGTCAATGGCAGATGATAATGGTGGTGTTGAAGTGGAGGAGTTTGTGGTGAGTGGCAAGGCAAGAATTATGGTTTTAAATATAGACCGAACCCGGCTTCTAAGAGAATTGCCAGAAAGTGCACAGTATCAGCAGCTTGAATCAAGTTCTGGAGATGTGAATCAAAATCAAGTTCAGCAAATCACTACCAGTGGTACTAATGTGAATGGTAGTTTGCTTGGGATGGGAAGGCCGGTTCTGAGGCCAATGTCTGATATGTGGATACCCCATGGGGACCCCCATATGTCTGGGTTGCAGCCAATGTTTTCAGGAGGACCAAGGGGAGCACCCAGAGTAATGGGCATGATGGGGACACAGAGAGGTATAAGTATTCCTTCAATGCATAGAATCCCATTGGGGCCAAATGCACCAGGGAGTAGTCCTAATGCAATGCCACAGAAACCTAGAACTTTAGAGGATGATATGAAGGATCTTGAGGCATTGTTGAATAAGAAATCATTTAGGGAGATGCAAAAATCTAAAACTGGTGAGGAGCTTTTGGACCTAATTCACCGACCAACTGCAAGGGAGACTGCTGTAGCTGCTAAGTTCAAAACAAAAGGTGGTTCTCAGGTGAGGCAATACTGTGACTTGCTGACAAAAGAGGATTGTCGACGTCAATCTGGTTCCTTTATAGCATGTGATAAGGTTCATTTTAGACGGATCATTGCTCCTCATACTGACATCAATTTAGGAGACTGTTCTTTTCTTGATACTTGCCGACACATGAAGACATGCAAGTATGTTCACTATGAGTATGACCCTACACCTGATATGTCTCCAACAATGATGGGTGCTCCTCCTCCTCCAAAACCACTAAAGCCTCAGCGTGCTGAATATTGTTCTGAAGTGGAACTTGGTGAACCACAATGGATCAACTGTGATATACGTAATTTTAGAATGGACATTTTAGGTCAATTTGGAGTAATAATGGCAGATCCACCATGGGACATTCACATGGAACTGCCTTATGGAACAATGGCCGATGATGAAATGCGTAGTCTTAATGTTCCTGCTCTGCAAACTGATGGGCTTATTTTTCTATGGGTCACTGGACGTGCGATGGAACTTGGACGGGAATGCTTAGAACTTTGGGGATATAAACGTGTTGAGGAGATCATTTGGGTGAAAACAAATCAACTTCAGCGAATAATCAGAACTGGGCGTACAGGCCACTGGCTCAATCACAGTAAGGAACATTGTCTAGTTGGAATAAAGGGTAACCCTGAAGTAAACAGGAACATTGACACTGATGTTATTGTTGCTGAGGTCCGGGAAACAAGCCGCAAGCCAGATGAGATGTATCCTATGCTGGAGAGGATAAGTCCGAGAACAAGAAAGCTAGAATTATTTGCTCGCATGCACAATACTCATGCAGGATGGATGTCTCTTGGTAATCAATTGAATGGTGTAAGGTTGGTTGATGAGGGGCTGCGGGCAAGGTTTAAGGCTGCTTATCCAGATGTGGAGGTGCAGCCACCATCACCTCCCAGAGCTTCTGCTATGGAAGTAGACACTAGTGTTGCTACTCATTCGAGGAGTCCATTTGCAGCCACAGAATCTAAGTCCACTTCAACACAATTTGTGGAGCCTGCAGCAGCTCCAGAAACTTCCTTTCCTTCGGAGGAGAAGTCAATGACCATTGATGTGGACATTGGCTAA 2280 0.4456 METQSDGNEDTIATIKDMRQQLEARIESQHKAHMEMLASIQAVIPNLVSSLDLSLKVVSSFNHRPFAPTPSLPLPDPKLNPKKHVELTHRSNAETCADGPIEADLTNPKNQKPKTFVDSNPACQVESEKVSALAVVRSLVAVCLLGRVPFSPIDSSTMSRKLENDQTVTPTEKATLQELGGDSGATLAVEIALRSMADDNGGVEVEEFVVSGKARIMVLNIDRTRLLRELPESAQYQQLESSSGDVNQNQVQQITTSGTNVNGSLLGMGRPVLRPMSDMWIPHGDPHMSGLQPMFSGGPRGAPRVMGMMGTQRGISIPSMHRIPLGPNAPGSSPNAMPQKPRTLEDDMKDLEALLNKKSFREMQKSKTGEELLDLIHRPTARETAVAAKFKTKGGSQVRQYCDLLTKEDCRRQSGSFIACDKVHFRRIIAPHTDINLGDCSFLDTCRHMKTCKYVHYEYDPTPDMSPTMMGAPPPPKPLKPQRAEYCSEVELGEPQWINCDIRNFRMDILGQFGVIMADPPWDIHMELPYGTMADDEMRSLNVPALQTDGLIFLWVTGRAMELGRECLELWGYKRVEEIIWVKTNQLQRIIRTGRTGHWLNHSKEHCLVGIKGNPEVNRNIDTDVIVAEVRETSRKPDEMYPMLERISPRTRKLELFARMHNTHAGWMSLGNQLNGVRLVDEGLRARFKAAYPDVEVQPPSPPRASAMEVDTSVATHSRSPFAATESKSTSTQFVEPAAAPETSFPSEEKSMTIDVDIG 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2830 759 MobiDBLite consensus disorder prediction 711 738 - -
Ssu4g2830 759 MobiDBLite consensus disorder prediction 695 759 - -
Ssu4g2830 759 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 492 653 IPR029063 -
Ssu4g2830 759 ProSiteProfiles MT-A70-like family profile. 475 693 IPR007757 -
Ssu4g2830 759 PANTHER N6-ADENOSINE-METHYLTRANSFERASE 1 710 - -
Ssu4g2830 759 Pfam MT-A70 513 673 IPR007757 -
Ssu4g2830 759 PANTHER N6-ADENOSINE-METHYLTRANSFERASE CATALYTIC SUBUNIT 1 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2830 Ssu-Chr4 72225282 72228842 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2830 K05925 - gmx:100782695 1390.94