Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2824 ATGTTGTGGAAGTCCCTCGTGGCTGTGTCTAAGGCACGGTTTGGTACCCAAAGGCCTTCTTTGGTGACTCATTTGGTGAACCTGCGGAGAAGAATGGATGAGGCTCTTTGTCCTGAATATGCGATGGGAAATCTTCTTTGGTTAGTGGCTGCGGAGAACGTAAGTGATCATGAGATGGGGTTGGAGGAGTTGGTGGGGAAGTTGAAGAATGCAATATCAAAAGTTGATGGTGAATTTGTTGAAGAATTGAGAGGTGATAAGGGAAGGTCAATTATGCAGGAGAGTCTTGGAGCAATAGGTGAGAGGGGATCAAAGAGTGGAGTGGATTATTTTGGGTTTAGTAGTTGGTGCAATTTTGGGTTCTATGAGGCTGATTTTGGGTGGGGAAAGCCCACATGGGTGAGTGGTGTTGGTTCAGTCGGTTCTATTTCAGTGTTTATGAATCTGATCATCCTGGTGGAAACGAGGTTGGGAGATGGCATAGAAGCTTGGGTTACCTTGGAGGAGCAGGACATGACTCATTTGGAAGCAAACCCAGAACTCCTCACTTGTGCAACCCTGGATCCAAGTCCTTTTGCCATGAGTTCAATTGCTTGA 597 0.464 MLWKSLVAVSKARFGTQRPSLVTHLVNLRRRMDEALCPEYAMGNLLWLVAAENVSDHEMGLEELVGKLKNAISKVDGEFVEELRGDKGRSIMQESLGAIGERGSKSGVDYFGFSSWCNFGFYEADFGWGKPTWVSGVGSVGSISVFMNLIILVETRLGDGIEAWVTLEEQDMTHLEANPELLTCATLDPSPFAMSSIA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2824 198 PANTHER VINORINE SYNTHASE-LIKE 1 192 - -
Ssu4g2824 198 Pfam Transferase family 2 181 - -
Ssu4g2824 198 Gene3D - 1 184 IPR023213 -
Ssu4g2824 198 PANTHER F21J9.9 1 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2824 Ssu-Chr4 72085734 72086330 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2824 - - gmx:100305374 317.39